[←][→] ath   AT5G58410 Gene
functional annotation
Function   HEAT/U-box domain-containing protein  
GO BP
GO:1990116 [list] [network] ribosome-associated ubiquitin-dependent protein catabolic process  (2 genes)  IBA  
GO:0072344 [list] [network] rescue of stalled ribosome  (5 genes)  IBA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (188 genes)  IBA  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:1990112 [list] [network] RQC complex  (2 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0043023 [list] [network] ribosomal large subunit binding  (9 genes)  IBA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_001331639.1  NP_200649.1 
BLAST NP_001331639.1  NP_200649.1 
Orthologous [Ortholog page] LOC4327816 (osa)  LOC11406006 (mtr)  LOC100267314 (vvi)  LOC100775576 (gma)  LOC101247956 (sly)  LOC103647118 (zma)  LOC103845267 (bra)  LOC103856694 (bra) 
Subcellular
localization
wolf
chlo 7,  plas 1,  nucl 1,  cysk 1,  cysk_nucl 1,  golg_plas 1,  E.R._plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001331639.1)
chlo 7,  plas 1,  nucl 1,  cysk 1,  cysk_nucl 1,  golg_plas 1,  E.R._plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_200649.1)
Subcellular
localization
TargetP
chlo 6,  mito 4  (predict for NP_001331639.1)
chlo 6,  mito 4  (predict for NP_200649.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with AT5G58410 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.1 BIG auxin transport protein (BIG) [detail] 820398
10.5 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein [detail] 832375
10.3 SYD P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 817375
8.8 RST1 ARM repeat superfamily protein [detail] 822389
6.7 S1P SITE-1 protease [detail] 832086
6.6 REV3 recovery protein 3 [detail] 843071
5.4 AT4G11670 DNA topoisomerase 4 subunit B (DUF810) [detail] 826772
3.9 PHYD phytochrome D [detail] 827319
Coexpressed
gene list		 [Coexpressed gene list for AT5G58410]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247859_at
247859_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247859_at
247859_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247859_at
247859_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835954      
Refseq ID (protein) NP_001331639.1 
NP_200649.1 


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