[←][→] ath   AT5G58470 Gene
functional annotation
Function   TBP-associated factor 15B  
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_568879.3  NP_851215.1 
BLAST NP_568879.3  NP_851215.1 
Orthologous [Ortholog page] LOC4324412 (osa)  LOC11409261 (mtr)  LOC100261263 (vvi)  LOC100778472 (gma)  LOC100782124 (gma)  LOC100813547 (gma)  LOC101251999 (sly)  LOC103634842 (zma)  LOC103649720 (zma)  LOC103845274 (bra)  LOC103851637 (bra)  LOC103856687 (bra) 
Subcellular
localization
wolf
nucl 9,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_568879.3)
nucl 9,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_851215.1)
Subcellular
localization
TargetP
other 9  (predict for NP_568879.3)
other 9  (predict for NP_851215.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03015 mRNA surveillance pathway 3
Genes directly connected with TAF15b on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.0 CSP3 cold shock domain protein 3 [detail] 816297
11.0 AT3G58510 DEA(D/H)-box RNA helicase family protein [detail] 825020
10.2 AT3G07030 Alba DNA/RNA-binding protein [detail] 3768790
8.9 AT5G55670 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 835661
8.7 GRP2 glycine rich protein 2 [detail] 830024
8.5 ALY4 ALWAYS EARLY 4 [detail] 833750
8.3 AT2G33410 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 817905
8.2 AT2G42520 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 818852
7.9 GR-RBP5 glycine-rich RNA-binding protein 5 [detail] 843763
7.5 AT3G05220 Heavy metal transport/detoxification superfamily protein [detail] 819686
6.3 UBA1A RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 816744
6.1 AT3G13224 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 820515
5.8 AT5G25754 RNA polymerase I-associated factor PAF67 [detail] 832643
5.8 AT3G20890 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 821638
4.3 MYB1 myb domain protein 1 [detail] 820079
Coexpressed
gene list		 [Coexpressed gene list for TAF15b]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247825_at
247825_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247825_at
247825_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247825_at
247825_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835960      
Refseq ID (protein) NP_568879.3 
NP_851215.1 


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