[←][→] ath   AT5G59830 Gene
functional annotation
Function   DNA-binding protein  
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (206 genes)  IBA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0042393 [list] [network] histone binding  (72 genes)  IBA  
GO:0003682 [list] [network] chromatin binding  (126 genes)  IBA  
GO:0000977 [list] [network] RNA polymerase II regulatory region sequence-specific DNA binding  (152 genes)  IBA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IBA  
KEGG
Protein NP_001318842.1  NP_200791.2  NP_974964.1 
BLAST NP_001318842.1  NP_200791.2  NP_974964.1 
Orthologous [Ortholog page] LOC7485723 (ppo)  LOC7487245 (ppo)  LOC7489275 (ppo)  LOC11410178 (mtr)  LOC11438298 (mtr)  LOC25484103 (mtr)  LOC100251629 (vvi)  LOC100260456 (vvi)  LOC100792190 (gma)  LOC100794765 (gma)  LOC100802229 (gma)  LOC100819317 (gma)  LOC101254101 (sly)  LOC101267439 (sly)  LOC103851542 (bra)  LOC103867196 (bra) 
Subcellular
localization
wolf
nucl 9,  chlo 1,  vacu 1  (predict for NP_001318842.1)
nucl 9,  chlo 1,  vacu 1  (predict for NP_200791.2)
nucl 9,  chlo 1,  vacu 1  (predict for NP_974964.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001318842.1)
other 8  (predict for NP_200791.2)
other 8  (predict for NP_974964.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G59830 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 BET10 bromodomain and extraterminal domain protein 10 [detail] 821083
5.6 AT1G63980 D111/G-patch domain-containing protein [detail] 842701
5.4 TAFII59 TATA BOX ASSOCIATED FACTOR II 59 [detail] 839370
Coexpressed
gene list		 [Coexpressed gene list for AT5G59830]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247698_at
247698_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247698_at
247698_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247698_at
247698_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836104      
Refseq ID (protein) NP_001318842.1 
NP_200791.2 
NP_974964.1 


The preparation time of this page was 0.5 [sec].