[←][→] ath   AT5G62520 Gene
functional annotation
Function   similar to RCD one 5  
GO BP
GO:0072593 [list] [network] reactive oxygen species metabolic process  (133 genes)  IMP  
GO:0071456 [list] [network] cellular response to hypoxia  (238 genes)  HEP  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0016363 [list] [network] nuclear matrix  (9 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003950 [list] [network] NAD+ ADP-ribosyltransferase activity  (9 genes)  IEA  
KEGG
Protein NP_201058.1  NP_974981.1 
BLAST NP_201058.1  NP_974981.1 
Orthologous [Ortholog page] SRO4 (ath)  SRO2 (ath)  SRO3 (ath)  LOC4332145 (osa)  LOC7462266 (ppo)  LOC7463742 (ppo)  LOC7470710 (ppo)  LOC7470713 (ppo)  LOC7472623 (ppo)  LOC7483503 (ppo)  LOC11426589 (mtr)  LOC11431728 (mtr)  LOC25493765 (mtr)  LOC100245401 (vvi)  LOC100265712 (vvi)  LOC100279545 (zma)  LOC100784311 (gma)  LOC100791977 (gma)  LOC100804972 (gma)  LOC100813999 (gma)  LOC100852765 (vvi)  LOC101245634 (sly)  LOC101248910 (sly)  LOC101248971 (sly)  LOC101249263 (sly)  LOC101249914 (sly)  LOC101250212 (sly)  LOC102661356 (gma)  LOC103633148 (zma)  LOC103829266 (bra)  LOC103831575 (bra)  LOC103840746 (bra)  LOC103855014 (bra)  LOC103874692 (bra) 
Subcellular
localization
wolf
nucl 7,  cyto 1,  chlo 1,  extr 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_201058.1)
nucl 5,  chlo 2,  cyto 2  (predict for NP_974981.1)
Subcellular
localization
TargetP
other 9  (predict for NP_201058.1)
other 9  (predict for NP_974981.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SRO5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.5 CML38 calmodulin-like 38 [detail] 843998
8.3 CYP94B3 cytochrome P450, family 94, subfamily B, polypeptide 3 [detail] 824011
7.5 DDF1 Integrase-type DNA-binding superfamily protein [detail] 837817
7.4 BPS3 BPS1-like protein [detail] 827971
6.6 AT5G38700 cotton fiber protein [detail] 833860
5.3 AT5G16360 NC domain-containing protein-like protein [detail] 831497
4.3 NTM1 NAC with transmembrane motif1 [detail] 828149
4.1 CYP707A1 cytochrome P450, family 707, subfamily A, polypeptide 1 [detail] 827663
Coexpressed
gene list		 [Coexpressed gene list for SRO5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247431_at
247431_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247431_at
247431_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247431_at
247431_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836372      
Refseq ID (protein) NP_201058.1 
NP_974981.1 


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