[←][→] ath   AT5G62940 Gene
functional annotation
Function   Dof-type zinc finger DNA-binding family protein  
GO BP
GO:0090057 [list] [network] root radial pattern formation  (9 genes)  IGI  
GO:0010067 [list] [network] procambium histogenesis  (10 genes)  IMP  
GO:0010087 [list] [network] phloem or xylem histogenesis  (102 genes)  IMP  
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated  (495 genes)  IDA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS TAS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_201099.1 
BLAST NP_201099.1 
Orthologous [Ortholog page] LOC778107 (gma)  LOC4330470 (osa)  LOC7456845 (ppo)  LOC11430187 (mtr)  LOC100193142 (zma)  LOC100216759 (zma)  LOC100265549 (vvi)  LOC100783782 (gma)  LOC100806697 (gma)  LOC100815061 (gma)  LOC101253882 (sly)  LOC101267243 (sly)  LOC103837435 (bra)  LOC103874731 (bra) 
Subcellular
localization
wolf
nucl 8,  chlo 1,  extr 1,  vacu 1  (predict for NP_201099.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for NP_201099.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with HCA2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.5 SEOa sieve element occlusion protein [detail] 821096
8.1 GATA20 GATA transcription factor 20 [detail] 816353
8.0 SEOR1 sieve element occlusion amino-terminus protein [detail] 821097
7.9 ACI1 ALC-interacting protein 1 [detail] 831905
7.4 DOF6 Dof-type zinc finger DNA-binding family protein [detail] 823703
7.1 AT3G44220 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [detail] 823546
6.2 AT5G25490 Ran BP2/NZF zinc finger-like superfamily protein [detail] 832624
4.9 AT2G22730 Major facilitator superfamily protein [detail] 816803
4.0 AT1G32860 Glycosyl hydrolase superfamily protein [detail] 840180
Coexpressed
gene list		 [Coexpressed gene list for HCA2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247397_at
247397_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247397_at
247397_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247397_at
247397_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836414      
Refseq ID (protein) NP_201099.1 


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