[←][→] ath   AT5G63670 Gene
functional annotation
Function   SPT4 homolog 2  
GO BP
GO:0032786 [list] [network] positive regulation of DNA-templated transcription, elongation  (24 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_001190609.1  NP_568976.1 
BLAST NP_001190609.1  NP_568976.1 
Orthologous [Ortholog page] LOC4343956 (osa)  LOC7454302 (ppo)  LOC11430820 (mtr)  LOC11444230 (mtr)  LOC100261013 (vvi)  LOC100284208 (zma)  LOC100306659 (gma)  LOC100812057 (gma)  LOC101248963 (sly)  LOC103855061 (bra)  LOC103855801 (bra) 
Subcellular
localization
wolf
cyto 8,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for NP_001190609.1)
cyto 5,  chlo 3,  cyto_nucl 3,  cyto_plas 3  (predict for NP_568976.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for NP_001190609.1)
other 4,  mito 3  (predict for NP_568976.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SPT42 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 AT4G38490 transmembrane protein [detail] 830005
7.2 ENA DnaJ/Hsp40 cysteine-rich domain superfamily protein [detail] 5008005
6.7 AT5G01650 Tautomerase/MIF superfamily protein [detail] 831707
6.7 AT2G35795 Chaperone DnaJ-domain superfamily protein [detail] 818152
6.1 AT5G48335 hypothetical protein [detail] 2746200
5.8 MED21 mediator 21 [detail] 825815
5.7 AT5G12320 ankyrin repeat family protein [detail] 831107
5.4 AT5G10050 NAD(P)-binding Rossmann-fold superfamily protein [detail] 830869
Coexpressed
gene list		 [Coexpressed gene list for SPT42]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247355_at
247355_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247355_at
247355_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247355_at
247355_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836487      
Refseq ID (protein) NP_001190609.1 
NP_568976.1 


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