[←][→] ath   AT5G63880 Gene
functional annotation
Function   SNF7 family protein  
GO BP
GO:0007034 [list] [network] vacuolar transport  (89 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  ISS  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0000815 [list] [network] ESCRT III complex  (11 genes)  ISS  
GO:0005768 [list] [network] endosome  (424 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_001190610.1  NP_568980.1 
BLAST NP_001190610.1  NP_568980.1 
Orthologous [Ortholog page] VPS20.2 (ath)  LOC4329866 (osa)  LOC7466867 (ppo)  LOC11420731 (mtr)  LOC100216677 (zma)  LOC100248753 (vvi)  LOC100272755 (zma)  LOC100775459 (gma)  LOC100820408 (gma)  LOC101250100 (sly)  LOC103847195 (bra)  LOC103873806 (bra) 
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1,  cysk 1,  chlo_mito 1,  cysk_nucl 1  (predict for NP_001190610.1)
cyto 6,  cyto_nucl 5,  chlo 1,  nucl 1  (predict for NP_568980.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001190610.1)
other 7  (predict for NP_568980.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with VPS20.1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 AT4G30240 Syntaxin/t-SNARE family protein [detail] 829147
6.3 AT5G50840 alpha-taxilin-like protein [detail] 835156
6.1 AT2G02570 nucleic acid binding/RNA binding protein [detail] 814787
5.0 AT1G10410 CW14 protein (DUF1336) [detail] 837581
4.8 AT5G25790 Tesmin/TSO1-like CXC domain-containing protein [detail] 832648
3.4 AT5G28830 calcium-binding EF hand family protein [detail] 833001
Coexpressed
gene list		 [Coexpressed gene list for VPS20.1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247302_at
247302_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247302_at
247302_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247302_at
247302_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836508      
Refseq ID (protein) NP_001190610.1 
NP_568980.1 


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