[←][→] ath   AT5G64270 Gene
functional annotation
Function   splicing factor  
GO BP
GO:0000245 [list] [network] spliceosomal complex assembly  (17 genes)  IBA  
GO CC
GO:0005689 [list] [network] U12-type spliceosomal complex  (18 genes)  IBA  
GO:0071004 [list] [network] U2-type prespliceosome  (24 genes)  IBA  
GO:0005686 [list] [network] U2 snRNP  (32 genes)  IBA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (48 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_201232.1 
BLAST NP_201232.1 
Orthologous [Ortholog page] LOC4328284 (osa)  LOC7461689 (ppo)  LOC11424216 (mtr)  LOC100243186 (vvi)  LOC100277544 (zma)  LOC100810599 (gma)  LOC101252641 (sly)  LOC103837520 (bra)  LOC103873845 (bra) 
Subcellular
localization
wolf
plas 6,  cyto 4  (predict for NP_201232.1)
Subcellular
localization
TargetP
other 8  (predict for NP_201232.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
Genes directly connected with AT5G64270 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.6 CER9 RING/U-box superfamily protein [detail] 829556
9.2 SWP RNA polymerase II transcription mediator [detail] 819634
9.1 AT5G42950 GYF domain-containing protein [detail] 834307
8.7 NFXL1 NF-X-like 1 [detail] 837555
8.2 EMB2770 pre-mRNA splicing factor-like protein [detail] 827925
7.9 SPY Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 820327
7.7 ILP1 GC-rich sequence DNA-binding factor-like protein [detail] 830755
7.6 ELF6 Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein [detail] 830303
7.1 AT2G47330 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 819346
5.4 PUM3 pumilio 3 [detail] 817463
Coexpressed
gene list		 [Coexpressed gene list for AT5G64270]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247271_at
247271_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247271_at
247271_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247271_at
247271_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836548      
Refseq ID (protein) NP_201232.1 


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