ATTED-II : GeneID search result

[←][→] ath AT5G65080 Gene

functional annotation

Function

K-box region/MADS-box transcription factor family protein

GO BP

GO:0010048 [list] [network] vernalization response	(12 genes)	IEP
GO:0048587 [list] [network] regulation of short-day photoperiodism, flowering	(14 genes)	IGI
GO:0009910 [list] [network] negative regulation of flower development	(50 genes)	IMP
GO:2000028 [list] [network] regulation of photoperiodism, flowering	(63 genes)	IGI
GO:0009908 [list] [network] flower development	(447 genes)	IEA
GO:0006355 [list] [network] regulation of transcription, DNA-templated	(1984 genes)	IEA
GO:0007275 [list] [network] multicellular organism development	(2714 genes)	IBA

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IBA ISM

GO MF

GO:0000977 [list] [network] RNA polymerase II regulatory region sequence-specific DNA binding	(152 genes)	IBA
GO:0008134 [list] [network] transcription factor binding	(173 genes)	IBA
GO:0046983 [list] [network] protein dimerization activity	(570 genes)	IEA
GO:0043565 [list] [network] sequence-specific DNA binding	(796 genes)	IBA
GO:0044212 [list] [network] transcription regulatory region DNA binding	(871 genes)	IBA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	ISS

KEGG

Protein

NP_001078799.2 NP_001318879.1 NP_001330487.1

BLAST

NP_001078799.2 NP_001318879.1 NP_001330487.1

Orthologous

[Ortholog page] FLC (ath) AGL31 (ath) MAF3 (ath) MAF4 (ath) MAF1 (ath) LOC7456243 (ppo) LOC100241171 (vvi) FLC (vvi) AGL3L (gma) LOC100804540 (gma) MBP15 (sly) LOC101247413 (sly) LOC101250404 (sly) FLC1 (bra) LOC103850339 (bra) LOC103855272 (bra) LOC103855273 (bra) LOC103855275 (bra) LOC103855854 (bra) LOC103857284 (bra) LOC103873930 (bra) LOC103873932 (bra)

Subcellular
localization
wolf

nucl 2, cyto_nucl 2, chlo 2, golg_plas 2, cyto 1, plas 1, golg 1	(predict for NP_001078799.2)
nucl 4, cyto 2, extr 2, cysk_nucl 2	(predict for NP_001318879.1)
nucl 4, chlo 2, cysk_nucl 2, golg_plas 1, plas 1, golg 1	(predict for NP_001330487.1)

Subcellular
localization
TargetP

other 4, chlo 3, mito 3	(predict for NP_001078799.2)
other 9	(predict for NP_001318879.1)
other 4, chlo 3, mito 3	(predict for NP_001330487.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for MAF5]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247224_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247224_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247224_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	836632
Refseq ID (protein)	NP_001078799.2
	NP_001318879.1
	NP_001330487.1

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