[←][→] ath   AT5G65540 Gene
functional annotation
Function   transcription initiation factor TFIID subunit  
GO BP
GO:0006413 [list] [network] translational initiation  (95 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (95 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (122 genes)  IEA  
KEGG
Protein NP_201357.2 
BLAST NP_201357.2 
Orthologous [Ortholog page] LOC4334465 (osa)  LOC11407034 (mtr)  LOC100194043 (zma)  LOC100241274 (vvi)  LOC100776834 (gma)  LOC100801442 (gma)  LOC100852712 (vvi)  LOC101259248 (sly)  LOC103873992 (bra)  LOC112940342 (sly) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  cysk 1  (predict for NP_201357.2)
Subcellular
localization
TargetP
other 8  (predict for NP_201357.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 2
Genes directly connected with AT5G65540 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 DPB Transcription factor DP [detail] 831847
6.8 SIC hydroxyproline-rich glycoprotein family protein [detail] 828552
6.6 AT4G31200 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein [detail] 829247
6.1 AT1G50620 RING/FYVE/PHD zinc finger superfamily protein [detail] 841484
6.1 AT1G10820 hypothetical protein (DUF3755) [detail] 837625
6.0 TAF5 TBP-associated factor 5 [detail] 832586
5.9 AT3G53860 INO80 complex subunit D-like protein [detail] 824553
5.5 AT2G02148 PPR containing protein [detail] 10723082
5.4 AT3G45750 Nucleotidyltransferase family protein [detail] 823717
Coexpressed
gene list		 [Coexpressed gene list for AT5G65540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247171_at
247171_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247171_at
247171_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247171_at
247171_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836680      
Refseq ID (protein) NP_201357.2 


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