[←][→] ath   AT1G06550 Gene
functional annotation
Function   ATP-dependent caseinolytic (Clp) protease/crotonase family protein  
GO BP
GO:0080167 [list] [network] response to karrikin  (128 genes)  IEP  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  HDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO MF
GO:0003860 [list] [network] 3-hydroxyisobutyryl-CoA hydrolase activity  (7 genes)  IBA  
KEGG ath00280 [list] [network] Valine, leucine and isoleucine degradation (51 genes)
ath00410 [list] [network] beta-Alanine metabolism (47 genes)
ath00640 [list] [network] Propanoate metabolism (43 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
Protein NP_172142.2 
BLAST NP_172142.2 
Orthologous [Ortholog page] LOC4324637 (osa)  LOC7468727 (ppo)  LOC25488912 (mtr)  LOC100266026 (vvi)  LOC100283920 (zma)  LOC100811550 (gma)  LOC100818188 (gma)  LOC101263879 (sly)  LOC103836475 (bra) 
Subcellular
localization
wolf
nucl 4,  cysk 3,  cyto 2,  nucl_plas 2  (predict for NP_172142.2)
Subcellular
localization
TargetP
other 9  (predict for NP_172142.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 8
ath01230 Biosynthesis of amino acids 6
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
ath00360 Phenylalanine metabolism 4
ath00941 Flavonoid biosynthesis 2
Genes directly connected with AT1G06550 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.1 PAL1 PHE ammonia lyase 1 [detail] 818280
10.8 AT5G24760 GroES-like zinc-binding dehydrogenase family protein [detail] 832545
10.0 AAT aspartate aminotransferase [detail] 816758
7.9 CB5-B cytochrome B5 [detail] 817832
4.3 ABCI19 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 839376
3.7 AT2G43120 RmlC-like cupins superfamily protein [detail] 818914
Coexpressed
gene list		 [Coexpressed gene list for AT1G06550]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262619_at
262619_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262619_at
262619_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262619_at
262619_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837166      
Refseq ID (protein) NP_172142.2 


The preparation time of this page was 2.1 [sec].