[←][→] ath   AT1G06820 Gene
functional annotation
Function   carotenoid isomerase  
GO BP
GO:0009662 [list] [network] etioplast organization  (3 genes)  IMP  
GO:0016117 [list] [network] carotenoid biosynthetic process  (34 genes)  IEA IGI TAS  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0031969 [list] [network] chloroplast membrane  (259 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM TAS  
GO MF
GO:0046608 [list] [network] carotenoid isomerase activity  (1 genes)  IGI IMP  
GO:0016491 [list] [network] oxidoreductase activity  (1435 genes)  IEA  
KEGG ath00906 [list] [network] Carotenoid biosynthesis (29 genes)
Protein NP_001322208.1  NP_001322209.1  NP_001322210.1  NP_172167.2 
BLAST NP_001322208.1  NP_001322209.1  NP_001322210.1  NP_172167.2 
Orthologous [Ortholog page] LOC4350758 (osa)  LOC7479491 (ppo)  LOC7488070 (ppo)  LOC25483622 (mtr)  LOC100263250 (vvi)  LOC100281663 (zma)  LOC100281747 (zma)  LOC100798275 (gma)  LOC100811616 (gma)  CRTISO (sly)  LOC103843494 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_nucl 3  (predict for NP_001322208.1)
cyto 4,  nucl 3,  chlo 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_001322209.1)
chlo 6,  nucl 1,  cyto 1,  extr 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001322210.1)
cyto 5,  chlo 2,  nucl 2  (predict for NP_172167.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001322208.1)
other 6  (predict for NP_001322209.1)
scret 7  (predict for NP_001322210.1)
other 6  (predict for NP_172167.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath00740 Riboflavin metabolism 2
Genes directly connected with CRTISO on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 ABCI15 trigalactosyldiacylglycerol2 [detail] 821576
6.7 AT1G60990 Glycine cleavage T-protein family [detail] 842391
6.5 OEP80 outer envelope protein of 80 kDa [detail] 832082
5.1 PHS1 cytidine/deoxycytidylate deaminase family protein [detail] 823893
Coexpressed
gene list		 [Coexpressed gene list for CRTISO]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260821_at
260821_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260821_at
260821_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260821_at
260821_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837193      
Refseq ID (protein) NP_001322208.1 
NP_001322209.1 
NP_001322210.1 
NP_172167.2 


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