| functional annotation |
| Function |
Dof-type zinc finger DNA-binding family protein |
|
| GO BP |
|
GO:0090057 [list] [network] root radial pattern formation
|
(9 genes)
|
IGI
|
 |
|
GO:0010439 [list] [network] regulation of glucosinolate biosynthetic process
|
(12 genes)
|
IEP
IMP
|
|
|
GO:0009625 [list] [network] response to insect
|
(32 genes)
|
IEP
|
|
|
GO:2000280 [list] [network] regulation of root development
|
(79 genes)
|
IMP
|
|
|
GO:0003002 [list] [network] regionalization
|
(162 genes)
|
IMP
|
|
|
GO:0009611 [list] [network] response to wounding
|
(212 genes)
|
IEP
|
|
|
GO:0009753 [list] [network] response to jasmonic acid
|
(222 genes)
|
IEP
|
|
|
GO:0006355 [list] [network] regulation of transcription, DNA-templated
|
(1984 genes)
|
IEA
TAS
|
|
|
| GO CC |
|
| GO MF |
|
GO:0044212 [list] [network] transcription regulatory region DNA binding
|
(871 genes)
|
IPI
|
|
|
GO:0003700 [list] [network] DNA-binding transcription factor activity
|
(1599 genes)
|
ISS
|
|
|
GO:0003677 [list] [network] DNA binding
|
(2280 genes)
|
IEA
|
|
|
GO:0046872 [list] [network] metal ion binding
|
(3180 genes)
|
IEA
|
|
|
| KEGG |
|
|
| Protein |
NP_001030988.1
NP_563792.3
NP_850938.1
|
| BLAST |
NP_001030988.1
NP_563792.3
NP_850938.1
|
| Orthologous |
[Ortholog page]
AT2G28810 (ath)
LOC103836679 (bra)
LOC103843441 (bra)
LOC103864922 (bra)
|
Subcellular
localization
wolf |
|
nucl 9
|
(predict for NP_001030988.1)
|
|
nucl 8,
chlo 1,
chlo_mito 1
|
(predict for NP_563792.3)
|
|
chlo 6,
nucl 4
|
(predict for NP_850938.1)
|
|
Subcellular
localization
TargetP |
|
chlo 3,
other 3
|
(predict for NP_001030988.1)
|
|
chlo 5,
other 4
|
(predict for NP_563792.3)
|
|
other 7,
mito 3
|
(predict for NP_850938.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
Genes directly connected with OBP2 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 13.3 |
AT2G28810 |
Dof-type zinc finger DNA-binding family protein |
[detail] |
817430 |
| 9.2 |
AT2G03500 |
Homeodomain-like superfamily protein |
[detail] |
814878 |
| 9.2 |
HAM4 |
GRAS family transcription factor |
[detail] |
829824 |
| 9.0 |
MYR2 |
Homeodomain-like superfamily protein |
[detail] |
819558 |
| 6.9 |
SWEET11 |
Nodulin MtN3 family protein |
[detail] |
824035 |
| 6.9 |
MEE55 |
Serinc-domain containing serine and sphingolipid biosynthesis protein |
[detail] |
826965 |
| 5.0 |
AT5G53730 |
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
[detail] |
835454 |
|
Coexpressed
gene list |
[Coexpressed gene list for OBP2]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
261409_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
261409_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
261409_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT1G07640 Gene
