[][] ath   At1g08390 Gene
functional annotation
Function   recQ-mediated instability-like protein Plant GARDENPlant GARDEN JBrowse
GO BP
GO:2000042 [list] [network] negative regulation of double-strand break repair via homologous recombination  (1 genes)  IMP  
GO:0043007 [list] [network] maintenance of rDNA  (3 genes)  IGI  
GO:0006281 [list] [network] DNA repair  (203 genes)  IMP  
GO:0009555 [list] [network] pollen development  (376 genes)  IGI  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
KEGG
Protein NP_001320532.1  NP_172315.1 
BLAST NP_001320532.1  NP_172315.1 
Orthologous [Ortholog page] LOC7459538 (ppo)LOC9270058 (osa)LOC18098006 (ppo)LOC25492345 (mtr)LOC100780251 (gma)LOC101268839 (sly)LOC103871586 (bra)LOC123076595 (tae)LOC123087264 (tae)LOC123087265 (tae)LOC123090687 (tae)LOC123090688 (tae)LOC123095705 (tae)LOC123398553 (hvu)LOC123405491 (hvu)LOC123429843 (hvu)LOC123446933 (hvu)LOC123447152 (hvu)
Subcellular
localization
wolf
chlo 9  (predict for NP_001320532.1)
chlo 8,  cyto 1  (predict for NP_172315.1)
Subcellular
localization
TargetP
other 4  (predict for NP_001320532.1)
other 5,  mito 3  (predict for NP_172315.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ath01240 Biosynthesis of cofactors 2
Genes directly connected with AT1G08390 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.5 AT5G63480 mediator of RNA polymerase II transcription subunit [detail] 836467
5.0 AAE14 acyl-activating enzyme 14 [detail] 839932
4.8 AT3G47490 HNH endonuclease [detail] 823903
4.0 ABA2 NAD(P)-binding Rossmann-fold superfamily protein [detail] 841665
Coexpressed
gene list
[Coexpressed gene list for AT1G08390]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261742_at
261742_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261742_at
261742_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
261742_at
261742_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 837359    
Refseq ID (protein) NP_001320532.1 
NP_172315.1 


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