[←][→] ath   AT1G08460 Gene
functional annotation
Function   histone deacetylase 8  
GO BP
GO:0016575 [list] [network] histone deacetylation  (33 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0032041 [list] [network] NAD-dependent histone deacetylase activity (H3-K14 specific)  (12 genes)  IEA  
GO:0004407 [list] [network] histone deacetylase activity  (35 genes)  ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001320319.1  NP_563817.1 
BLAST NP_001320319.1  NP_563817.1 
Orthologous [Ortholog page] LOC4338920 (osa)  LOC4338921 (osa)  LOC7491105 (ppo)  LOC11412418 (mtr)  LOC100255252 (vvi)  HDA14 (gma)  LOC101257380 (sly)  LOC103843397 (bra)  LOC109461487 (zma) 
Subcellular
localization
wolf
cyto 5,  E.R. 4,  chlo 1,  golg 1  (predict for NP_001320319.1)
cyto 7,  cysk 1,  nucl 1,  mito 1,  cysk_plas 1  (predict for NP_563817.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001320319.1)
other 8  (predict for NP_563817.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath00061 Fatty acid biosynthesis 2
ath01212 Fatty acid metabolism 2
Genes directly connected with HDA08 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 MTN1 methylthioadenosine nucleosidase 1 [detail] 830035
6.1 AT3G45770 Polyketide synthase, enoylreductase family protein [detail] 823720
6.1 AT1G73380 hypothetical protein [detail] 843673
5.1 AT5G18210 NAD(P)-binding Rossmann-fold superfamily protein [detail] 831939
5.0 AT1G09910 Rhamnogalacturonate lyase family protein [detail] 837523
3.2 AT4G02815 [detail] 28719442
Coexpressed
gene list		 [Coexpressed gene list for HDA08]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261720_at
261720_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261720_at
261720_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261720_at
261720_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837366      
Refseq ID (protein) NP_001320319.1 
NP_563817.1 


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