ATTED-II : GeneID search result

[←][→] ath AT1G08810 Gene

functional annotation

Function

myb domain protein 60

GO BP

GO:0080148 [list] [network] negative regulation of response to water deprivation	(5 genes)	IMP
GO:1902074 [list] [network] response to salt	(20 genes)	IEP
GO:0009646 [list] [network] response to absence of light	(45 genes)	IEP
GO:0010118 [list] [network] stomatal movement	(59 genes)	IMP
GO:0009744 [list] [network] response to sucrose	(68 genes)	IEP
GO:0009637 [list] [network] response to blue light	(98 genes)	IEP
GO:0009411 [list] [network] response to UV	(120 genes)	IEP
GO:0009751 [list] [network] response to salicylic acid	(215 genes)	IEP
GO:0009753 [list] [network] response to jasmonic acid	(222 genes)	IEP
GO:0009414 [list] [network] response to water deprivation	(361 genes)	IEP
GO:0009733 [list] [network] response to auxin	(407 genes)	IEP
GO:0009409 [list] [network] response to cold	(411 genes)	IEP
GO:0009737 [list] [network] response to abscisic acid	(574 genes)	IEP IMP
GO:0009416 [list] [network] response to light stimulus	(700 genes)	IEP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IDA ISM

GO MF

GO:0044212 [list] [network] transcription regulatory region DNA binding	(871 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	ISS TAS

KEGG

Protein

NP_001318958.1 NP_172358.1 NP_973795.1

BLAST

NP_001318958.1 NP_172358.1 NP_973795.1

Orthologous

[Ortholog page] LOC541730 (zma) THM6 (sly) LOC778078 (gma) MYB60 (gma) MYB53 (gma) LOC780543 (gma) MYB94 (ath) MYB96 (ath) MYB31 (ath) LOC4335671 (osa) LOC4343245 (osa) LOC4347052 (osa) LOC4349657 (osa) LOC4350727 (osa) LOC4351379 (osa) LOC7463057 (ppo) LOC7495972 (ppo) LOC9272734 (osa) LOC11408513 (mtr) LOC11409960 (mtr) LOC11412291 (mtr) LOC11428992 (mtr) LOC25480441 (mtr) LOC25481134 (mtr) LOC100193481 (zma) MYB30 (vvi) MYB60 (vvi) LOC100257755 (vvi) LOC100282932 (zma) LOC100384664 (zma) LOC100794319 (gma) LOC100799402 (gma) LOC100802204 (gma) MYBJ2 (gma) LOC100812460 (gma) LOC100817854 (gma) LOC101253245 (sly) LOC101264168 (sly) LOC101267793 (sly) LOC103632739 (zma) LOC103643271 (zma) LOC103830692 (bra) LOC103831932 (bra) LOC103836374 (bra) LOC103837414 (bra) LOC103852915 (bra) LOC103855009 (bra) LOC103871622 (bra) LOC103874683 (bra) LOC107280380 (osa) LOC115100998 (zma)

Subcellular
localization
wolf

nucl 9, cyto_nucl 5	(predict for NP_001318958.1)
nucl 7, cyto 2	(predict for NP_172358.1)
nucl 9, cyto_nucl 5	(predict for NP_973795.1)

Subcellular
localization
TargetP

other 4	(predict for NP_001318958.1)
other 8	(predict for NP_172358.1)
other 4	(predict for NP_973795.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with MYB60 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
11.0	AT4G14480	Protein kinase superfamily protein	[detail]	827095
9.6	AT5G25840	DUF1677 family protein (DUF1677)	[detail]	832653
9.4	HT1	Protein kinase superfamily protein	[detail]	842538
7.7	AT1G78530	Protein kinase superfamily protein	[detail]	844189
5.0	LOV1	NAC domain containing protein 35	[detail]	814775

Coexpressed
gene list

[Coexpressed gene list for MYB60]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264782_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264782_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264782_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	837403
Refseq ID (protein)	NP_001318958.1
	NP_172358.1
	NP_973795.1

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