[][] ath   AT1G09730 Gene
functional annotation
Function   Cysteine proteinases superfamily protein
GO BP
GO:0048576 [list] [network] positive regulation of short-day photoperiodism, flowering  (3 genes)  IMP  
GO:0016926 [list] [network] protein desumoylation  (8 genes)  ISS  
GO:0048578 [list] [network] positive regulation of long-day photoperiodism, flowering  (9 genes)  IMP  
GO:0016925 [list] [network] protein sumoylation  (19 genes)  IMP  
GO:0006508 [list] [network] proteolysis  (901 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0070139 [list] [network] SUMO-specific endopeptidase activity  (5 genes)  IDA ISS  
KEGG
Protein NP_001184951.1  NP_172444.3 
BLAST NP_001184951.1  NP_172444.3 
Orthologous [Ortholog page] AT4G33620 (ath)LOC4338081 (osa)LOC7467199 (ppo)LOC7468856 (ppo)LOC7485033 (ppo)LOC11420879 (mtr)LOC11424218 (mtr)LOC11436687 (mtr)LOC100278181 (zma)LOC100790302 (gma)LOC100796777 (gma)LOC100800444 (gma)LOC100809894 (gma)LOC101262374 (sly)LOC101267564 (sly)LOC103836316 (bra)LOC103845672 (bra)LOC103871747 (bra)LOC104882498 (vvi)
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001184951.1)
nucl 7,  cyto 1,  vacu 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_172444.3)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for NP_001184951.1)
other 6,  chlo 4  (predict for NP_172444.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G09730 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.0 AT5G12400 PHD-finger and DNA binding domain-containing protein [detail] 831115
7.8 AT4G32160 Phox (PX) domain-containing protein [detail] 829348
7.4 AT4G29790 serine/arginine repetitive matrix protein [detail] 829101
6.3 GC6 golgin Putative 6 [detail] 822375
6.1 ATZW10 centromere/kinetochore protein, putative (ZW10) [detail] 817851
Coexpressed
gene list
[Coexpressed gene list for AT1G09730]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264707_at
264707_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264707_at
264707_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
264707_at
264707_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 837501    
Refseq ID (protein) NP_001184951.1 
NP_172444.3 


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