[←][→] ath   AT1G09900 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR-like) superfamily protein  
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
KEGG
Protein NP_172461.1 
BLAST NP_172461.1 
Orthologous [Ortholog page] LOC100267729 (vvi)  LOC100790288 (gma)  LOC100790449 (gma)  LOC100791459 (gma)  LOC101264430 (sly)  LOC103871770 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 1,  pero 1,  plas 1,  E.R. 1,  golg 1,  golg_plas 1,  E.R._plas 1  (predict for NP_172461.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for NP_172461.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00230 Purine metabolism 2
Genes directly connected with AT1G09900 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.6 MEE40 Pentatricopeptide repeat (PPR) superfamily protein [detail] 824537
8.4 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein [detail] 837383
7.9 SVR7 pentatricopeptide (PPR) repeat-containing protein [detail] 827333
6.0 PUR2 Glycinamide ribonucleotide (GAR) synthetase [detail] 837515
5.3 SCY2 SecY protein transport family protein [detail] 817711
4.6 CDS4 cytidinediphosphate diacylglycerol synthase 4 [detail] 819123
4.4 AT5G44490 FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein [detail] 834476
4.3 AT1G09995 DNA repair DEAD helicase RAD3/XP-D subfamily protein [detail] 837534
Coexpressed
gene list		 [Coexpressed gene list for AT1G09900]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264689_at
264689_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264689_at
264689_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264689_at
264689_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837522      
Refseq ID (protein) NP_172461.1 


The preparation time of this page was 0.2 [sec].