[←][→] ath   AT1G10390 Gene
functional annotation
Function   Nucleoporin autopeptidase  
GO BP
GO:0000973 [list] [network] posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery  (5 genes)  IBA  
GO:0034398 [list] [network] telomere tethering at nuclear periphery  (5 genes)  IBA  
GO:1902446 [list] [network] regulation of shade avoidance  (5 genes)  IMP  
GO:0006406 [list] [network] mRNA export from nucleus  (30 genes)  IMP  
GO:0006405 [list] [network] RNA export from nucleus  (47 genes)  IBA  
GO:0006606 [list] [network] protein import into nucleus  (47 genes)  IBA  
GO CC
GO:0044614 [list] [network] nuclear pore cytoplasmic filaments  (5 genes)  IBA  
GO:0031965 [list] [network] nuclear membrane  (42 genes)  IDA  
GO:0005635 [list] [network] nuclear envelope  (121 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0008139 [list] [network] nuclear localization sequence binding  (20 genes)  IBA  
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03013 [list] [network] RNA transport (171 genes)
Protein NP_001031018.1  NP_001320682.1  NP_172510.2 
BLAST NP_001031018.1  NP_001320682.1  NP_172510.2 
Orthologous [Ortholog page] AT1G59660 (ath)  LOC4325429 (osa)  LOC4351597 (osa)  LOC4351598 (osa)  LOC7455018 (ppo)  LOC25484578 (mtr)  LOC100249633 (vvi)  LOC100279429 (zma)  LOC100786534 (gma)  LOC100789177 (gma)  LOC101202711 (zma)  LOC101245750 (sly)  LOC103838591 (bra)  LOC103868097 (bra)  LOC103871810 (bra)  LOC104644288 (sly) 
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for NP_001031018.1)
chlo 6,  nucl 4  (predict for NP_001320682.1)
chlo 6,  nucl 4  (predict for NP_172510.2)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001031018.1)
chlo 8  (predict for NP_001320682.1)
chlo 8  (predict for NP_172510.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
Genes directly connected with AT1G10390 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 NUP1 nuclear pore complex protein [detail] 820234
8.6 ELF7 hydroxyproline-rich glycoprotein family protein [detail] 844312
8.5 AT5G51300 splicing factor-like protein [detail] 835204
8.2 NAC052 NAC domain containing protein 52 [detail] 820213
8.2 SE C2H2 zinc-finger protein SERRATE (SE) [detail] 817252
8.1 DCP5 decapping 5 [detail] 839152
7.2 AT1G15280 CASC3/Barentsz eIF4AIII binding protein [detail] 838095
5.6 HSL1 HSI2-like 1 [detail] 829332
Coexpressed
gene list		 [Coexpressed gene list for AT1G10390]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264456_at
264456_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264456_at
264456_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264456_at
264456_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837579      
Refseq ID (protein) NP_001031018.1 
NP_001320682.1 
NP_172510.2 


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