[←][→] ath   AT1G11890 Gene
functional annotation
Function   Synaptobrevin family protein  
GO BP
GO:0048280 [list] [network] vesicle fusion with Golgi apparatus  (8 genes)  IBA  
GO:0006890 [list] [network] retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum  (29 genes)  IBA  
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport  (84 genes)  IBA  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0005793 [list] [network] endoplasmic reticulum-Golgi intermediate compartment  (21 genes)  IBA  
GO:0012507 [list] [network] ER to Golgi transport vesicle membrane  (29 genes)  IBA  
GO:0031201 [list] [network] SNARE complex  (32 genes)  IBA  
GO:0000139 [list] [network] Golgi membrane  (404 genes)  IBA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IBA  
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IBA IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0005484 [list] [network] SNAP receptor activity  (39 genes)  IBA  
KEGG ath04130 [list] [network] SNARE interactions in vesicular transport (44 genes)
ath04145 [list] [network] Phagosome (82 genes)
Protein NP_172653.1 
BLAST NP_172653.1 
Orthologous [Ortholog page] LOC4334384 (osa)  LOC7461944 (ppo)  LOC9271327 (osa)  LOC11420702 (mtr)  LOC100258366 (vvi)  LOC100272807 (zma)  LOC100779110 (gma)  LOC100795552 (gma)  LOC101249373 (sly)  LOC101257054 (sly)  LOC101261994 (sly)  LOC103644161 (zma)  LOC103836200 (bra)  LOC103843217 (bra)  LOC103872051 (bra) 
Subcellular
localization
wolf
chlo 3,  plas 2,  golg 1,  chlo_mito 1,  E.R._plas 1,  cyto 1,  cyto_nucl 1,  cysk_plas 1,  mito_plas 1  (predict for NP_172653.1)
Subcellular
localization
TargetP
other 6  (predict for NP_172653.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
ath04144 Endocytosis 2
ath00520 Amino sugar and nucleotide sugar metabolism 2
Genes directly connected with SEC22 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 AT5G61240 Leucine-rich repeat (LRR) family protein [detail] 836245
6.9 SYP32 syntaxin of plants 32 [detail] 822024
6.4 AT4G30260 Integral membrane Yip1 family protein [detail] 829149
6.2 WIH2 proline-rich family protein [detail] 818740
5.7 AT2G21190 ER lumen protein retaining receptor family protein [detail] 816655
5.6 AT1G29060 Target SNARE coiled-coil domain protein [detail] 839780
Coexpressed
gene list		 [Coexpressed gene list for SEC22]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264373_at
264373_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264373_at
264373_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264373_at
264373_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837737      
Refseq ID (protein) NP_172653.1 


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