[←][→] ath   AT1G12840 Gene
functional annotation
Function   vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3)  
GO BP
GO:0009809 [list] [network] lignin biosynthetic process  (47 genes)  IGI  
GO:0043255 [list] [network] regulation of carbohydrate biosynthetic process  (52 genes)  IGI  
GO:1902600 [list] [network] proton transmembrane transport  (66 genes)  IEA  
GO:0009826 [list] [network] unidimensional cell growth  (279 genes)  IMP  
GO CC
GO:0000221 [list] [network] vacuolar proton-transporting V-type ATPase, V1 domain  (2 genes)  IBA IDA  
GO:0000325 [list] [network] plant-type vacuole  (169 genes)  IDA  
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  HDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  RCA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO MF
GO:0046961 [list] [network] proton-transporting ATPase activity, rotational mechanism  (18 genes)  IBA IGI  
GO:0008553 [list] [network] proton-exporting ATPase activity, phosphorylative mechanism  (22 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath00190 [list] [network] Oxidative phosphorylation (142 genes)
ath04145 [list] [network] Phagosome (82 genes)
Protein NP_563916.1 
BLAST NP_563916.1 
Orthologous [Ortholog page] LOC4339800 (osa)  LOC11429113 (mtr)  LOC100267004 (vvi)  LOC100273246 (zma)  LOC100274416 (zma)  LOC100281241 (zma)  LOC100790694 (gma)  LOC100803728 (gma)  LOC100813963 (gma)  LOC101251661 (sly)  LOC103836138 (bra)  LOC103843100 (bra)  LOC103871975 (bra) 
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  plas 1,  cyto_nucl 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_563916.1)
Subcellular
localization
TargetP
mito 3,  other 3  (predict for NP_563916.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 13
ath04145 Phagosome 13
Genes directly connected with DET3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.2 AT3G13410 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [detail] 820541
10.1 TUF vacuolar ATP synthase subunit E1 [detail] 826716
9.9 VHA-A vacuolar ATP synthase subunit A [detail] 844228
9.5 PMP putative type 1 membrane protein [detail] 822002
8.9 AT3G58730 vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) [detail] 825042
7.9 AT3G28715 ATPase, V0/A0 complex, subunit C/D [detail] 822503
6.4 CAP1 cyclase associated protein 1 [detail] 829600
5.6 AT1G27000 GRIP/coiled-coil protein, putative (DUF1664) [detail] 839590
5.6 AT3G28710 ATPase, V0/A0 complex, subunit C/D [detail] 822502
Coexpressed
gene list		 [Coexpressed gene list for DET3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261210_at
261210_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261210_at
261210_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261210_at
261210_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837840      
Refseq ID (protein) NP_563916.1 


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