[←][→] ath   AT1G13190 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_172778.1 
BLAST NP_172778.1 
Orthologous [Ortholog page] AT5G55670 (ath)  LOC4345901 (osa)  LOC4347363 (osa)  LOC7460729 (ppo)  LOC7473194 (ppo)  LOC25489148 (mtr)  LOC25489149 (mtr)  LOC100246290 (vvi)  LOC100268141 (vvi)  LOC100782869 (gma)  LOC100811056 (gma)  LOC100813702 (gma)  LOC100813748 (gma)  LOC101251182 (sly)  LOC101251491 (sly)  LOC101251795 (sly)  LOC103641415 (zma)  LOC103641426 (zma)  LOC103845018 (bra)  LOC103851867 (bra)  LOC103856971 (bra)  LOC103871953 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_172778.1)
Subcellular
localization
TargetP
other 9  (predict for NP_172778.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT1G13190 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 AT5G55670 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 835661
6.8 ASIL1 6B-interacting protein 1-like 1 [detail] 841844
6.2 AT3G62330 Zinc knuckle (CCHC-type) family protein [detail] 825406
6.2 AT2G44730 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [detail] 819080
Coexpressed
gene list		 [Coexpressed gene list for AT1G13190]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262770_at
262770_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262770_at
262770_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262770_at
262770_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837877      
Refseq ID (protein) NP_172778.1 


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