[←][→] ath   AT1G15280 Gene
functional annotation
Function   CASC3/Barentsz eIF4AIII binding protein  
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
KEGG
Protein NP_172980.3  NP_850944.1 
BLAST NP_172980.3  NP_850944.1 
Orthologous [Ortholog page] AT1G80000 (ath)  LOC4326389 (osa)  LOC4339434 (osa)  LOC7478142 (ppo)  LOC7478385 (ppo)  LOC25491383 (mtr)  LOC100191432 (zma)  LOC100193574 (zma)  LOC100256571 (vvi)  LOC100382646 (zma)  LOC100779103 (gma)  LOC100792594 (gma)  LOC100796971 (gma)  LOC100816837 (gma)  LOC101247414 (sly)  LOC101264103 (sly)  LOC103635880 (zma)  LOC103830413 (bra)  LOC103836036 (bra)  LOC103872319 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_172980.3)
nucl 10  (predict for NP_850944.1)
Subcellular
localization
TargetP
other 8  (predict for NP_172980.3)
other 8  (predict for NP_850944.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 4
ath03015 mRNA surveillance pathway 4
Genes directly connected with AT1G15280 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 GTE4 global transcription factor group E4 [detail] 837133
7.2 AT1G10390 Nucleoporin autopeptidase [detail] 837579
7.1 LBA1 RNA helicase [detail] 834747
6.4 UPF3 Smg-4/UPF3 family protein [detail] 840295
5.8 AT1G64050 hypothetical protein [detail] 842709
Coexpressed
gene list		 [Coexpressed gene list for AT1G15280]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262576_at
262576_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262576_at
262576_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262576_at
262576_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838095      
Refseq ID (protein) NP_172980.3 
NP_850944.1 


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