[←][→] ath   AT1G15310 Gene
functional annotation
Function   signal recognition particle 54 kDa subunit  
GO BP
GO:0006616 [list] [network] SRP-dependent cotranslational protein targeting to membrane, translocation  (9 genes)  IBA  
GO CC
GO:0005786 [list] [network] signal recognition particle, endoplasmic reticulum targeting  (10 genes)  IBA ISS  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM ISS  
GO MF
GO:0030942 [list] [network] endoplasmic reticulum signal peptide binding  (4 genes)  IBA  
GO:0008312 [list] [network] 7S RNA binding  (9 genes)  IBA  
GO:0003924 [list] [network] GTPase activity  (169 genes)  IBA  
GO:0005525 [list] [network] GTP binding  (248 genes)  IEA  
KEGG ath03060 [list] [network] Protein export (54 genes)
Protein NP_563970.1 
BLAST NP_563970.1 
Orthologous [Ortholog page] LOC544156 (sly)  AT5G49500 (ath)  AT5G66970 (ath)  AT1G48900 (ath)  LOC4324712 (osa)  LOC4339274 (osa)  LOC7487461 (ppo)  LOC11419634 (mtr)  LOC11420996 (mtr)  LOC100261219 (vvi)  LOC100274376 (zma)  LOC100502496 (zma)  LOC100789217 (gma)  LOC100792778 (gma)  LOC100811698 (gma)  LOC100815799 (gma)  SRP54 (sly)  LOC103630576 (zma)  LOC103832974 (bra)  LOC103833119 (bra)  LOC103871438 (bra)  LOC103872323 (bra) 
Subcellular
localization
wolf
cyto 9  (predict for NP_563970.1)
Subcellular
localization
TargetP
other 8  (predict for NP_563970.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
ath03010 Ribosome 2
ath03060 Protein export 2
Genes directly connected with ATHSRP54A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.1 NUC-L2 nucleolin like 2 [detail] 821392
4.6 AT1G67650 SRP72 RNA-binding domain-containing protein [detail] 843090
4.3 AT3G16650 Transducin/WD40 repeat-like superfamily protein [detail] 820917
Coexpressed
gene list		 [Coexpressed gene list for ATHSRP54A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262601_at
262601_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262601_at
262601_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262601_at
262601_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838100      
Refseq ID (protein) NP_563970.1 


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