[←][→] ath   AT1G15360 Gene
functional annotation
Function   Integrase-type DNA-binding superfamily protein  
GO BP
GO:0010143 [list] [network] cutin biosynthetic process  (17 genes)  IMP  
GO:0010166 [list] [network] wax metabolic process  (24 genes)  IMP  
GO:0009873 [list] [network] ethylene-activated signaling pathway  (191 genes)  TAS  
GO:0009414 [list] [network] response to water deprivation  (361 genes)  IMP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO:0005622 [list] [network] intracellular  (21658 genes)  TAS  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IDA ISS TAS  
KEGG
Protein NP_001322723.1  NP_172988.1 
BLAST NP_001322723.1  NP_172988.1 
Orthologous [Ortholog page] SHN2 (ath)  SHN3 (ath)  LOC4328653 (osa)  LOC4341466 (osa)  LOC7459028 (ppo)  LOC7470102 (ppo)  LOC7485479 (ppo)  LOC11420370 (mtr)  LOC11428823 (mtr)  LOC11435277 (mtr)  LOC11435980 (mtr)  LOC11439229 (mtr)  LOC100250826 (vvi)  LOC100259484 (vvi)  LOC100266250 (vvi)  LOC100282301 (zma)  LOC100778381 (gma)  LOC100779921 (gma)  LOC100784305 (gma)  LOC100787517 (gma)  LOC100794649 (gma)  LOC100796962 (gma)  LOC100806821 (gma)  LOC100814893 (gma)  LOC100819868 (gma)  ERF-H3 (sly)  SHINE3 (sly)  LOC103836031 (bra)  LOC103837090 (bra)  LOC103842907 (bra)  LOC103846747 (bra)  LOC103848009 (bra)  LOC103872327 (bra)  LOC103874400 (bra) 
Subcellular
localization
wolf
nucl 7,  mito 1,  chlo 1,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001322723.1)
nucl 7,  mito 1,  chlo 1,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for NP_172988.1)
Subcellular
localization
TargetP
mito 8,  other 4  (predict for NP_001322723.1)
mito 8,  other 4  (predict for NP_172988.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SHN1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 AP1 K-box region and MADS-box transcription factor family protein [detail] 843244
8.5 AT5G22430 Pollen Ole e 1 allergen and extensin family protein [detail] 832304
8.2 RXF26 GDSL-like Lipase/Acylhydrolase family protein [detail] 842212
Coexpressed
gene list		 [Coexpressed gene list for SHN1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262595_at
262595_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262595_at
262595_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262595_at
262595_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838105      
Refseq ID (protein) NP_001322723.1 
NP_172988.1 


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