ATTED-II : GeneID search result

[←][→] ath AT1G17020 Gene

functional annotation

Function

senescence-related gene 1

GO BP

GO:0010150 [list] [network] leaf senescence	(111 genes)	IEP
GO:0055114 [list] [network] oxidation-reduction process	(1468 genes)	IEA ISS

GO CC

GO:0005737 [list] [network] cytoplasm

(14855 genes)

ISM

GO MF

GO:0016682 [list] [network] oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	(26 genes)	ISS
GO:0051213 [list] [network] dioxygenase activity	(147 genes)	IBA
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

Protein

NP_173145.1

BLAST

NP_173145.1

Orthologous

[Ortholog page] AT4G25300 (ath) AT4G25310 (ath) AT1G17010 (ath) AT1G78550 (ath) LOC4326481 (osa) LOC4326482 (osa) LOC4334835 (osa) LOC4349360 (osa) LOC4349361 (osa) LOC4349363 (osa) LOC4349365 (osa) LOC4349369 (osa) LOC7470800 (ppo) LOC7488146 (ppo) LOC11408226 (mtr) LOC11409657 (mtr) LOC11411290 (mtr) LOC11413723 (mtr) LOC11418968 (mtr) LOC25479525 (mtr) LOC25479545 (mtr) LOC25480055 (mtr) LOC25480889 (mtr) LOC25482640 (mtr) LOC25487167 (mtr) LOC25487169 (mtr) LOC25487170 (mtr) LOC25494677 (mtr) LOC25494678 (mtr) LOC25494680 (mtr) LOC25494687 (mtr) LOC25494692 (mtr) LOC25501314 (mtr) LOC100193608 (zma) LOC100241907 (vvi) LOC100243524 (vvi) LOC100245014 (vvi) LOC100245262 (vvi) LOC100245473 (vvi) LOC100246788 (vvi) LOC100247046 (vvi) LOC100248824 (vvi) LOC100248938 (vvi) LOC100253917 (vvi) LOC100255836 (vvi) LOC100257300 (vvi) LOC100258917 (vvi) LOC100259799 (vvi) LOC100260522 (vvi) LOC100260905 (vvi) LOC100264138 (vvi) LOC100264195 (vvi) LOC100265741 (vvi) LOC100265850 (vvi) LOC100265856 (vvi) LOC100266726 (vvi) LOC100267456 (vvi) LOC100267565 (vvi) LOC100267786 (vvi) LOC100282672 (zma) LOC100501344 (zma) LOC100775942 (gma) LOC100777264 (gma) LOC100777788 (gma) LOC100781946 (gma) LOC100782741 (gma) LOC100786017 (gma) LOC100786574 (gma) LOC100786964 (gma) LOC100790293 (gma) LOC100797528 (gma) LOC100801225 (gma) LOC100802304 (gma) LOC100807726 (gma) LOC100810764 (gma) LOC100817012 (gma) LOC100820310 (gma) LOC100853481 (vvi) LOC101249194 (sly) LOC101258026 (sly) LOC101260598 (sly) LOC101261190 (sly) LOC101261481 (sly) LOC101261774 (sly) LOC101262071 (sly) LOC103625710 (zma) LOC103652111 (zma) LOC103652113 (zma) LOC103832334 (bra) LOC103834879 (bra) LOC103842815 (bra) LOC103842818 (bra) LOC103861543 (bra) LOC103863102 (bra) LOC103864786 (bra) LOC103872488 (bra) LOC112935986 (osa) LOC112936592 (osa) LOC113002612 (sly)

Subcellular
localization
wolf

cyto 4, chlo 2, cyto_nucl 2, extr 1, cysk 1, chlo_mito 1

(predict for NP_173145.1)

Subcellular
localization
TargetP

other 6, scret 3

(predict for NP_173145.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00460	Cyanoamino acid metabolism	3
ath00500	Starch and sucrose metabolism	2
ath00940	Phenylpropanoid biosynthesis	2

Genes directly connected with SRG1 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.5	NIT2	nitrilase 2	[detail]	823555
5.7	AT3G10320	Glycosyltransferase family 61 protein	[detail]	820194
5.4	AT3G57380	Glycosyltransferase family 61 protein	[detail]	824905
5.0	GOX3	Aldolase-type TIM barrel family protein	[detail]	827563
3.8	AT1G62370	RING/U-box superfamily protein	[detail]	842535
3.8	CCD8	carotenoid cleavage dioxygenase 8	[detail]	829417

Coexpressed
gene list

[Coexpressed gene list for SRG1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

262482_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

262482_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

262482_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	838272
Refseq ID (protein)	NP_173145.1

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