[←][→] ath   AT1G17620 Gene
functional annotation
Function   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family  
GO BP
GO CC
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IBA IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA ISM  
GO MF
KEGG
Protein NP_564029.1 
BLAST NP_564029.1 
Orthologous [Ortholog page] EMB3135 (ath)  LOC4326313 (osa)  LOC4327322 (osa)  LOC7463755 (ppo)  LOC7470698 (ppo)  LOC9268269 (osa)  LOC11421488 (mtr)  LOC11429867 (mtr)  LOC25500453 (mtr)  LOC100254397 (vvi)  LOC100273348 (zma)  LOC100279368 (zma)  LOC100286305 (zma)  LOC100286382 (zma)  LOC100775320 (gma)  LOC100784963 (gma)  LOC100786652 (gma)  LOC100819194 (gma)  LOC101252955 (sly)  LOC101258680 (sly)  LOC101266204 (sly)  LOC101266707 (sly)  LOC102669753 (gma)  LOC103636025 (zma)  LOC103835947 (bra)  LOC103846686 (bra)  LOC103850799 (bra)  LOC103856850 (bra)  LOC103864842 (bra)  LOC103872544 (bra)  LOC104880217 (vvi) 
Subcellular
localization
wolf
extr 5,  cyto 3,  chlo 1,  vacu 1,  cysk_nucl 1  (predict for NP_564029.1)
Subcellular
localization
TargetP
other 9  (predict for NP_564029.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G17620 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.4 AT4G35320 hypothetical protein [detail] 829686
7.1 AT1G45688 transmembrane protein [detail] 841102
6.8 AT3G28200 Peroxidase superfamily protein [detail] 822446
6.3 AT4G24805 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 828583
5.4 AT5G49280 hydroxyproline-rich glycoprotein family protein [detail] 834988
5.4 AT1G72790 hydroxyproline-rich glycoprotein family protein [detail] 843610
4.3 PRA1.B5 prenylated RAB acceptor 1.B5 [detail] 831708
Coexpressed
gene list		 [Coexpressed gene list for AT1G17620]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260686_at
260686_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260686_at
260686_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260686_at
260686_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838339      
Refseq ID (protein) NP_564029.1 


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