[←][→] ath   AT1G17640 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001319031.1  NP_001320299.1  NP_173208.1 
BLAST NP_001319031.1  NP_001320299.1  NP_173208.1 
Orthologous [Ortholog page] LOC4328758 (osa)  LOC4341330 (osa)  LOC100193339 (zma)  LOC100266965 (vvi)  LOC100273471 (zma)  LOC100279268 (zma)  LOC100382538 (zma)  LOC100818080 (gma)  LOC101263390 (sly)  LOC103872546 (bra) 
Subcellular
localization
wolf
nucl 8,  chlo 1,  plas 1,  extr 1  (predict for NP_001319031.1)
nucl 8,  chlo 1,  plas 1,  extr 1  (predict for NP_001320299.1)
nucl 8,  chlo 1,  plas 1,  extr 1  (predict for NP_173208.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001319031.1)
other 9  (predict for NP_001320299.1)
other 9  (predict for NP_173208.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT1G17640 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.8 AT4G10925 Nuclear transport factor 2 (NTF2) family protein [detail] 826691
4.7 AT5G05550 sequence-specific DNA binding transcription factor [detail] 830438
4.4 AT1G16250 Galactose oxidase/kelch repeat superfamily protein [detail] 838194
Coexpressed
gene list		 [Coexpressed gene list for AT1G17640]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260733_at
260733_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260733_at
260733_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260733_at
260733_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838341      
Refseq ID (protein) NP_001319031.1 
NP_001320299.1 
NP_173208.1 


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