[←][→] ath   AT1G20100 Gene
functional annotation
Function   DNA ligase-like protein  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0016874 [list] [network] ligase activity  (232 genes)  IEA  
KEGG
Protein NP_001117316.1  NP_564102.1 
BLAST NP_001117316.1  NP_564102.1 
Orthologous [Ortholog page] AT4G35940 (ath)  AT1G75860 (ath)  AT1G76230 (ath)  AT2G17787 (ath)  LOC7472116 (ppo)  LOC7490631 (ppo)  LOC7493984 (ppo)  LOC11422495 (mtr)  LOC11434357 (mtr)  LOC100242117 (vvi)  LOC100254073 (vvi)  LOC100776119 (gma)  LOC100777835 (gma)  LOC101267887 (sly)  LOC103832037 (bra)  LOC103832283 (bra)  LOC103835372 (bra)  LOC103837828 (bra)  LOC103845917 (bra)  LOC103848317 (bra)  LOC103862448 (bra)  LOC103871997 (bra)  LOC103872811 (bra)  LOC104878349 (vvi) 
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  chlo 2  (predict for NP_001117316.1)
nucl 6,  mito 1,  chlo 1,  cyto 1,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for NP_564102.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_001117316.1)
mito 5,  other 4  (predict for NP_564102.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G20100 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.2 AT1G75860 DNA ligase [detail] 843919
5.3 AT1G04210 Leucine-rich repeat protein kinase family protein [detail] 839441
5.2 AT4G35940 hypothetical protein [detail] 829749
4.6 AT5G17370 Transducin/WD40 repeat-like superfamily protein [detail] 831603
Coexpressed
gene list		 [Coexpressed gene list for AT1G20100]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261225_at
261225_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261225_at
261225_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261225_at
261225_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838599      
Refseq ID (protein) NP_001117316.1 
NP_564102.1 


The preparation time of this page was 0.1 [sec].