[←][→] ath   AT1G20410 Gene
functional annotation
Function   Pseudouridine synthase family protein  
GO BP
GO:0031119 [list] [network] tRNA pseudouridine synthesis  (5 genes)  IBA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0009982 [list] [network] pseudouridine synthase activity  (20 genes)  IBA  
KEGG
Protein NP_001322439.1  NP_173466.2 
BLAST NP_001322439.1  NP_173466.2 
Orthologous [Ortholog page] LOC4336659 (osa)  LOC7485629 (ppo)  LOC25482221 (mtr)  LOC100193157 (zma)  LOC100242087 (vvi)  LOC100780683 (gma)  LOC101251773 (sly)  LOC103829430 (bra)  LOC103872835 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 5,  cyto_nucl 5  (predict for NP_001322439.1)
chlo 3,  nucl 2,  cysk_nucl 1,  plas 1,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  golg_plas 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_173466.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001322439.1)
other 7  (predict for NP_173466.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 2
Genes directly connected with AT1G20410 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.2 AT1G05950 hypothetical protein [detail] 837105
4.9 PRMT4B protein arginine methyltransferase 4B [detail] 819878
4.9 TPR3 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 839442
Coexpressed
gene list		 [Coexpressed gene list for AT1G20410]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259571_at
259571_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259571_at
259571_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259571_at
259571_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838630      
Refseq ID (protein) NP_001322439.1 
NP_173466.2 


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