[←][→] ath   AT1G20490 Gene
functional annotation
Function   AMP-dependent synthetase and ligase family protein  
GO BP
GO CC
GO:0005777 [list] [network] peroxisome  (325 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0016207 [list] [network] 4-coumarate-CoA ligase activity  (13 genes)  ISS  
GO:0016874 [list] [network] ligase activity  (232 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath00592 [list] [network] alpha-Linolenic acid metabolism (44 genes)
Protein NP_001322801.1  NP_173473.2 
BLAST NP_001322801.1  NP_173473.2 
Orthologous [Ortholog page] 4CL8 (ath)  AT1G20500 (ath)  OPCL1 (ath)  LOC4331515 (osa)  LOC11445262 (mtr)  LOC25482216 (mtr)  LOC100243654 (vvi)  LOC100265969 (vvi)  LOC100274307 (zma)  LOC100811344 (gma)  LOC101251665 (sly)  LOC103829425 (bra)  LOC103829426 (bra)  LOC103835791 (bra)  LOC103835792 (bra)  LOC103835794 (bra)  LOC103835795 (bra)  LOC103872841 (bra) 
Subcellular
localization
wolf
cyto 5,  E.R. 2,  chlo 1,  E.R._plas 1  (predict for NP_001322801.1)
cyto 5,  E.R. 2,  chlo 1,  E.R._plas 1  (predict for NP_173473.2)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for NP_001322801.1)
other 6,  chlo 4  (predict for NP_173473.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G20490 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.1 AT3G59710 NAD(P)-binding Rossmann-fold superfamily protein [detail] 825140
3.8 AT4G29690 Alkaline-phosphatase-like family protein [detail] 829090
3.7 MC7 metacaspase 7 [detail] 844269
Coexpressed
gene list		 [Coexpressed gene list for AT1G20490]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259568_at
259568_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259568_at
259568_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259568_at
259568_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838637      
Refseq ID (protein) NP_001322801.1 
NP_173473.2 


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