[←][→] ath   AT1G20540 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IBA  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO MF
KEGG
Protein NP_173478.2 
BLAST NP_173478.2 
Orthologous [Ortholog page] DWA2 (ath)  LOC4346273 (osa)  LOC25490295 (mtr)  LOC100257408 (vvi)  LOC100280050 (zma)  LOC100283807 (zma)  LOC100779030 (gma)  LOC101255790 (sly)  LOC103832076 (bra)  LOC103871534 (bra)  LOC103872844 (bra) 
Subcellular
localization
wolf
chlo 3,  mito 3,  chlo_mito 3,  nucl 1,  cyto 1,  pero 1,  cyto_nucl 1,  cyto_mito 1,  cyto_pero 1,  mito_plas 1  (predict for NP_173478.2)
Subcellular
localization
TargetP
other 7  (predict for NP_173478.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with AT1G20540 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 AT4G38490 transmembrane protein [detail] 830005
7.1 AT5G65740 zinc ion binding protein [detail] 836703
6.6 AT1G70150 zinc ion binding protein [detail] 843351
6.6 AT3G56830 YCF20-like protein (DUF565) [detail] 824850
6.5 AT1G05970 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 837107
6.3 AT5G27400 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 832799
5.8 AT3G62970 zinc finger (C3HC4-type RING finger) family protein [detail] 825472
5.7 GalAK galacturonic acid kinase [detail] 820239
5.3 CSD3 copper/zinc superoxide dismutase 3 [detail] 831928
5.0 AT1G18773 acyl thioesterase-like protein [detail] 6240661
4.9 ATPUP13 Drug/metabolite transporter superfamily protein [detail] 826438
Coexpressed
gene list		 [Coexpressed gene list for AT1G20540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259564_at
259564_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259564_at
259564_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259564_at
259564_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838642      
Refseq ID (protein) NP_173478.2 


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