[←][→] ath   AT1G24450 Gene
functional annotation
Function   Ribonuclease III family protein  
GO BP
GO:0031054 [list] [network] pre-miRNA processing  (3 genes)  IBA  
GO:0031053 [list] [network] primary miRNA processing  (12 genes)  IBA  
GO:0000741 [list] [network] karyogamy  (31 genes)  IMP  
GO:0010197 [list] [network] polar nucleus fusion  (31 genes)  IMP  
GO:0030422 [list] [network] production of siRNA involved in RNA interference  (34 genes)  IBA  
GO:0006396 [list] [network] RNA processing  (831 genes)  IBA  
GO CC
GO:0005773 [list] [network] vacuole  (1133 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO MF
GO:0004525 [list] [network] ribonuclease III activity  (10 genes)  IBA  
GO:0003725 [list] [network] double-stranded RNA binding  (16 genes)  IBA  
KEGG
Protein NP_173854.1 
BLAST NP_173854.1 
Orthologous [Ortholog page] LOC7458025 (ppo)  LOC9268233 (osa)  LOC11426389 (mtr)  NFD2 (vvi)  LOC100280485 (zma)  LOC100527745 (gma)  LOC101250978 (sly)  LOC103839064 (bra)  LOC112421098 (mtr) 
Subcellular
localization
wolf
chlo 5,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_173854.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_173854.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with NFD2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.8 CLV2 Leucine-rich repeat (LRR) family protein [detail] 842849
5.5 PLMT phospholipid N-methyltransferase [detail] 844425
5.0 AT1G02290 hypothetical protein [detail] 839255
4.6 AT1G68220 aerobic coproporphyrinogen-III oxidase (DUF1218) [detail] 843151
Coexpressed
gene list		 [Coexpressed gene list for NFD2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265027_at
265027_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265027_at
265027_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265027_at
265027_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839061      
Refseq ID (protein) NP_173854.1 


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