ATTED-II : GeneID search result

[←][→] ath AT1G24620 Gene

functional annotation

Function

EF hand calcium-binding protein family

GO BP

GO:0048767 [list] [network] root hair elongation	(66 genes)	IMP
GO:0009409 [list] [network] response to cold	(411 genes)	IEP

GO CC

GO:0005634 [list] [network] nucleus	(10793 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IDA

GO MF

GO:0005509 [list] [network] calcium ion binding

(242 genes)

IBA

KEGG

ath04626 [list] [network] Plant-pathogen interaction (170 genes)

Protein

NP_173866.1

BLAST

NP_173866.1

Orthologous

[Ortholog page] AT2G36180 (ath) AT3G03400 (ath) AT5G17470 (ath) TCH2 (ath) AT1G18210 (ath) CML23 (ath) LOC4325693 (osa) LOC7457800 (ppo) LOC7462676 (ppo) LOC9266860 (osa) LOC11413696 (mtr) LOC25482520 (mtr) LOC25483093 (mtr) LOC25483102 (mtr) LOC25489270 (mtr) LOC25494506 (mtr) LOC25496749 (mtr) LOC100264572 (vvi) LOC100284548 (zma) LOC100790109 (gma) LOC100790641 (gma) LOC100791597 (gma) LOC100796491 (gma) LOC100806182 (gma) LOC100806813 (gma) LOC100813092 (gma) LOC100814980 (gma) LOC100815264 (gma) LOC100818136 (gma) LOC101247547 (sly) LOC101252553 (sly) LOC101253387 (sly) LOC101259138 (sly) LOC101265722 (sly) LOC103649813 (zma) LOC103829131 (bra) LOC103831103 (bra) LOC103835433 (bra) LOC103835916 (bra) LOC103839085 (bra) LOC103855544 (bra) LOC103864150 (bra) LOC103872587 (bra) LOC106794329 (gma)

Subcellular
localization
wolf

cyto 2, extr 2, pero 2, cyto_pero 2, nucl 1

(predict for NP_173866.1)

Subcellular
localization
TargetP

other 6

(predict for NP_173866.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT1G24620]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

257405_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

257405_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

257405_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	839076
Refseq ID (protein)	NP_173866.1

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