[←][→] ath   AT1G25580 Gene
functional annotation
Function   NAC (No Apical Meristem) domain transcriptional regulator superfamily protein  
GO BP
GO:0000077 [list] [network] DNA damage checkpoint  (10 genes)  IMP  
GO:0040020 [list] [network] regulation of meiotic nuclear division  (15 genes)  IMP  
GO:0010332 [list] [network] response to gamma radiation  (16 genes)  IMP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IBA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IBA IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
KEGG
Protein NP_564238.2 
BLAST NP_564238.2 
Orthologous [Ortholog page] LOC4340715 (osa)  LOC7488338 (ppo)  LOC7489370 (ppo)  LOC11406966 (mtr)  LOC11425980 (mtr)  LOC100266255 (vvi)  LOC100280252 (zma)  LOC100787422 (gma)  NAC170 (gma)  LOC100799488 (gma)  LOC100803236 (gma)  LOC101265920 (sly)  LOC103829163 (bra)  LOC103840596 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1  (predict for NP_564238.2)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for NP_564238.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
Genes directly connected with SOG1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.4 AT5G57580 Calmodulin-binding protein [detail] 835862
5.3 PUM6 pumilio 6 [detail] 828694
5.3 CPK5 calmodulin-domain protein kinase 5 [detail] 829685
Coexpressed
gene list		 [Coexpressed gene list for SOG1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255739_at
255739_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255739_at
255739_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255739_at
255739_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839145      
Refseq ID (protein) NP_564238.2 


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