[←][→] ath   AT1G26670 Gene
functional annotation
Function   Vesicle transport v-SNARE family protein  
GO BP
GO:0048280 [list] [network] vesicle fusion with Golgi apparatus  (8 genes)  IBA  
GO:0006896 [list] [network] Golgi to vacuole transport  (19 genes)  IBA  
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (24 genes)  IBA  
GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport  (35 genes)  IBA TAS  
GO:0006623 [list] [network] protein targeting to vacuole  (36 genes)  IBA IMP  
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport  (84 genes)  IBA  
GO:0046907 [list] [network] intracellular transport  (626 genes)  TAS  
GO CC
GO:0012507 [list] [network] ER to Golgi transport vesicle membrane  (29 genes)  IBA  
GO:0031201 [list] [network] SNARE complex  (32 genes)  IBA  
GO:0031902 [list] [network] late endosome membrane  (61 genes)  IBA  
GO:0005770 [list] [network] late endosome  (91 genes)  TAS  
GO:0005802 [list] [network] trans-Golgi network  (298 genes)  IDA TAS  
GO:0005768 [list] [network] endosome  (424 genes)  IDA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IBA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IBA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005483 [list] [network] soluble NSF attachment protein activity  (3 genes)  TAS  
GO:0005484 [list] [network] SNAP receptor activity  (39 genes)  IBA  
GO:0000149 [list] [network] SNARE binding  (54 genes)  IBA TAS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04130 [list] [network] SNARE interactions in vesicular transport (44 genes)
Protein NP_564255.1 
BLAST NP_564255.1 
Orthologous [Ortholog page] VTI13 (ath)  SGR4 (ath)  LOC4327678 (osa)  LOC7480581 (ppo)  LOC7492914 (ppo)  LOC7495993 (ppo)  LOC7498189 (ppo)  LOC11412506 (mtr)  LOC11416325 (mtr)  LOC11422160 (mtr)  LOC25488812 (mtr)  LOC100248505 (vvi)  LOC100259152 (vvi)  LOC100280807 (zma)  LOC100500007 (gma)  LOC100527319 (gma)  LOC100801744 (gma)  LOC100815385 (gma)  LOC100816145 (gma)  LOC101266321 (sly)  LOC103829198 (bra)  LOC103837204 (bra)  LOC103849621 (bra)  LOC104647326 (sly) 
Subcellular
localization
wolf
golg 4,  nucl 1,  cyto 1,  cyto_nucl 1,  chlo 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  chlo_mito 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_pero 1,  E.R._plas 1,  mito_plas 1  (predict for NP_564255.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564255.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
Genes directly connected with VTI1B on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.1 AT2G14910 MAR-binding filament-like protein [detail] 815980
8.5 AT1G51200 A20/AN1-like zinc finger family protein [detail] 841543
8.1 LARP6a RNA-binding protein [detail] 834667
7.2 AT4G03030 Galactose oxidase/kelch repeat superfamily protein [detail] 828110
7.0 APG5 autophagy protein Apg5 family [detail] 831594
6.3 TLP2 tubby like protein 2 [detail] 816344
6.2 AT2G46490 hypothetical protein [detail] 819258
6.2 AT1G55000 peptidoglycan-binding LysM domain-containing protein [detail] 841942
6.1 AT2G39000 Acyl-CoA N-acyltransferases (NAT) superfamily protein [detail] 818486
5.9 AT1G15400 hypothetical protein [detail] 838110
Coexpressed
gene list		 [Coexpressed gene list for VTI1B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261276_at
261276_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261276_at
261276_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261276_at
261276_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839208      
Refseq ID (protein) NP_564255.1 


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