[←][→] ath   AT1G01980 Gene
functional annotation
Function   FAD-binding Berberine family protein  
GO BP
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IDA IEA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (220 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0016899 [list] [network] oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor  (24 genes)  IDA  
GO:0071949 [list] [network] FAD binding  (68 genes)  IEA  
KEGG
Protein NP_171700.1 
BLAST NP_171700.1 
Orthologous [Ortholog page] AT4G20830 (ath)  AT4G20840 (ath)  AT1G11770 (ath)  LOC7480401 (ppo)  LOC11407647 (mtr)  LOC11420001 (mtr)  LOC25493364 (mtr)  LOC100245607 (vvi)  LOC100246147 (vvi)  LOC100249571 (vvi)  LOC100264985 (vvi)  LOC100775893 (gma)  LOC100776438 (gma)  LOC100781731 (gma)  LOC100788228 (gma)  LOC100788233 (gma)  LOC100796809 (gma)  LOC100797188 (gma)  LOC100797739 (gma)  LOC100813175 (gma)  LOC101264571 (sly)  LOC103834173 (bra)  LOC103850258 (bra)  LOC103858408 (bra)  LOC103861201 (bra)  LOC103861202 (bra)  LOC103871928 (bra)  LOC112421407 (mtr) 
Subcellular
localization
wolf
cyto 3,  vacu 2,  E.R. 2,  E.R._vacu 2  (predict for NP_171700.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_171700.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath00040 Pentose and glucuronate interconversions 2
Genes directly connected with AT1G01980 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 AT3G01240 splicing regulatory glutamine/lysine-rich-like protein [detail] 821219
9.2 AT5G07430 Pectin lyase-like superfamily protein [detail] 830634
9.2 AT5G48140 Pectin lyase-like superfamily protein [detail] 834866
7.6 EXO70H3 exocyst subunit exo70 family protein H3 [detail] 820110
7.4 AT1G03050 ENTH/ANTH/VHS superfamily protein [detail] 839416
6.2 AT5G42490 ATP binding microtubule motor family protein [detail] 834256
Coexpressed
gene list		 [Coexpressed gene list for AT1G01980]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261623_at
261623_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261623_at
261623_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261623_at
261623_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839296      
Refseq ID (protein) NP_171700.1 


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