| functional annotation |
| Function |
BEACH-DOMAIN HOMOLOG A1 |
|
| GO BP |
|
GO:1904580 [list] [network] regulation of intracellular mRNA localization
|
(1 genes)
|
IMP
|
 |
|
GO:1903335 [list] [network] regulation of vacuolar transport
|
(2 genes)
|
IGI
|
|
|
GO:0080001 [list] [network] mucilage extrusion from seed coat
|
(10 genes)
|
IGI
|
|
|
GO:0033962 [list] [network] cytoplasmic mRNA processing body assembly
|
(11 genes)
|
IMP
|
|
|
GO:0009825 [list] [network] multidimensional cell growth
|
(39 genes)
|
IMP
|
|
|
GO:0071472 [list] [network] cellular response to salt stress
|
(40 genes)
|
IMP
|
|
|
GO:0007033 [list] [network] vacuole organization
|
(54 genes)
|
IMP
|
|
|
GO:0010090 [list] [network] trichome morphogenesis
|
(62 genes)
|
IMP
|
|
|
GO:0009737 [list] [network] response to abscisic acid
|
(574 genes)
|
IDA
|
|
|
| GO CC |
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_001322128.1
NP_001322129.1
NP_001322130.1
NP_171805.1
|
| BLAST |
NP_001322128.1
NP_001322129.1
NP_001322130.1
NP_171805.1
|
| Orthologous |
[Ortholog page]
AT4G02660 (ath)
LOC9267157 (osa)
LOC11431269 (mtr)
LOC100264735 (vvi)
LOC100381565 (zma)
LOC100784514 (gma)
LOC100793711 (gma)
LOC101267054 (sly)
LOC103843709 (bra)
LOC103844534 (bra)
LOC103858751 (bra)
|
Subcellular
localization
wolf |
|
plas 6,
nucl 3,
golg_plas 3,
cysk_plas 3,
cyto_plas 3
|
(predict for NP_001322128.1)
|
|
plas 6,
nucl 3,
golg_plas 3,
cysk_plas 3,
cyto_plas 3
|
(predict for NP_001322129.1)
|
|
plas 6,
nucl 3,
golg_plas 3,
cysk_plas 3,
cyto_plas 3
|
(predict for NP_001322130.1)
|
|
plas 6,
nucl 3,
golg_plas 3,
cysk_plas 3,
cyto_plas 3
|
(predict for NP_171805.1)
|
|
Subcellular
localization
TargetP |
|
chlo 6
|
(predict for NP_001322128.1)
|
|
chlo 6
|
(predict for NP_001322129.1)
|
|
chlo 7
|
(predict for NP_001322130.1)
|
|
chlo 7
|
(predict for NP_171805.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath04120 |
Ubiquitin mediated proteolysis |
3 |
 |
| ath04136 |
Autophagy - other |
2 |
 |
Genes directly connected with SPI on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 13.8 |
BIG |
auxin transport protein (BIG) |
[detail] |
820398 |
| 13.0 |
UPL2 |
ubiquitin-protein ligase 2 |
[detail] |
843368 |
| 12.5 |
AT5G23110 |
Zinc finger, C3HC4 type (RING finger) family protein |
[detail] |
832375 |
| 9.0 |
AT5G12400 |
PHD-finger and DNA binding domain-containing protein |
[detail] |
831115 |
| 8.4 |
FAB1C |
FORMS APLOID AND BINUCLEATE CELLS 1C |
[detail] |
843440 |
| 7.4 |
ATG2 |
autophagy 2 |
[detail] |
821453 |
| 5.9 |
AT1G77460 |
CELLULOSE SYNTHASE INTERACTIVE 3 |
[detail] |
844082 |
| 5.8 |
VIIIA |
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
[detail] |
841458 |
| 4.4 |
AT4G02660 |
Beige/BEACH and WD40 domain-containing protein |
[detail] |
828210 |
|
Coexpressed
gene list |
[Coexpressed gene list for SPI]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
263165_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
263165_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
263165_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT1G03060 Gene
