[←][→] ath   AT1G04880 Gene
functional annotation
Function   HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein  
GO BP
GO:0009846 [list] [network] pollen germination  (67 genes)  IMP  
GO:0019760 [list] [network] glucosinolate metabolic process  (111 genes)  IMP  
GO:0009860 [list] [network] pollen tube growth  (129 genes)  IMP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0090406 [list] [network] pollen tube  (80 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0000400 [list] [network] four-way junction DNA binding  (5 genes)  IDA  
GO:0008134 [list] [network] transcription factor binding  (173 genes)  IPI  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
KEGG
Protein NP_171980.1 
BLAST NP_171980.1 
Orthologous [Ortholog page] AT3G13350 (ath)  AT1G76110 (ath)  LOC4329340 (osa)  LOC7485626 (ppo)  LOC11414168 (mtr)  LOC11416271 (mtr)  LOC11440754 (mtr)  LOC25490276 (mtr)  LOC100244598 (vvi)  LOC100260501 (vvi)  LOC100266033 (vvi)  LOC100277834 (zma)  LOC100280617 (zma)  LOC100783284 (gma)  LOC100784746 (gma)  LOC100789037 (gma)  LOC100793029 (gma)  LOC100807028 (gma)  LOC101249807 (sly)  LOC101251156 (sly)  LOC101265586 (sly)  LOC103832057 (bra)  LOC103836549 (bra)  LOC103843632 (bra)  LOC103844207 (bra)  LOC103870177 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_171980.1)
Subcellular
localization
TargetP
other 5  (predict for NP_171980.1)
Gene coexpression
Network*for
coexpressed
genes
Coexpressed
gene list		 [Coexpressed gene list for AT1G04880]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261171_at
261171_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261171_at
261171_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261171_at
261171_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839388      
Refseq ID (protein) NP_171980.1 


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