ATTED-II : GeneID search result

[←][→] ath AT1G03620 Gene

functional annotation

Function

ELMO/CED-12 family protein

GO BP

GO CC

GO:0005634 [list] [network] nucleus	(10793 genes)	ISM
GO:0005737 [list] [network] cytoplasm	(14855 genes)	ISM

GO MF

KEGG

Protein

NP_001321012.1 NP_001321013.1 NP_001321014.1 NP_001321015.1 NP_001321016.1 NP_001321017.1 NP_001321018.1 NP_001321019.1 NP_001321020.1 NP_001321021.1 NP_001321022.1 NP_001321023.1 NP_171859.1

BLAST

NP_001321012.1 NP_001321013.1 NP_001321014.1 NP_001321015.1 NP_001321016.1 NP_001321017.1 NP_001321018.1 NP_001321019.1 NP_001321020.1 NP_001321021.1 NP_001321022.1 NP_001321023.1 NP_171859.1

Orthologous

[Ortholog page] LOC4334887 (osa) LOC7497382 (ppo) LOC25480747 (mtr) LOC100192852 (zma) LOC100267122 (vvi) LOC100283240 (zma) LOC100800270 (gma) LOC100811853 (gma) LOC101260480 (sly) LOC103836608 (bra) LOC103844490 (bra)

Subcellular
localization
wolf

nucl 5, mito 3, cyto_mito 2, chlo 1	(predict for NP_001321012.1)
mito 4, cyto_mito 3, chlo 2, nucl 1, cyto 1, plas 1, cysk_nucl 1, cyto_plas 1	(predict for NP_001321013.1)
mito 4, cyto_mito 3, chlo 2, nucl 1, cyto 1, plas 1, cysk_nucl 1, cyto_plas 1	(predict for NP_001321014.1)
nucl 4, cyto 2, plas 1, mito 1, cysk 1, golg 1, E.R._plas 1	(predict for NP_001321015.1)
nucl 4, cyto 2, plas 1, mito 1, cysk 1, golg 1, E.R._plas 1	(predict for NP_001321016.1)
nucl 4, cyto 2, plas 1, mito 1, cysk 1, golg 1, E.R._plas 1	(predict for NP_001321017.1)
mito 4, cyto_mito 3, chlo 2, nucl 1, cyto 1, plas 1, cysk_nucl 1, cyto_plas 1	(predict for NP_001321018.1)
nucl 4, cyto 2, plas 1, mito 1, cysk 1, golg 1, E.R._plas 1	(predict for NP_001321019.1)
nucl 4, cyto 2, plas 1, mito 1, cysk 1, golg 1, E.R._plas 1	(predict for NP_001321020.1)
nucl 4, cyto 2, plas 1, mito 1, cysk 1, golg 1, E.R._plas 1	(predict for NP_001321021.1)
nucl 4, cyto 2, plas 1, mito 1, cysk 1, golg 1, E.R._plas 1	(predict for NP_001321022.1)
nucl 4, cyto 2, plas 1, mito 1, cysk 1, golg 1, E.R._plas 1	(predict for NP_001321023.1)
nucl 4, cyto 2, plas 1, mito 1, cysk 1, golg 1, E.R._plas 1	(predict for NP_171859.1)

Subcellular
localization
TargetP

mito 6, other 4	(predict for NP_001321012.1)
mito 8	(predict for NP_001321013.1)
mito 8	(predict for NP_001321014.1)
other 8	(predict for NP_001321015.1)
other 8	(predict for NP_001321016.1)
other 8	(predict for NP_001321017.1)
mito 8	(predict for NP_001321018.1)
other 8	(predict for NP_001321019.1)
other 8	(predict for NP_001321020.1)
other 8	(predict for NP_001321021.1)
other 8	(predict for NP_001321022.1)
other 8	(predict for NP_001321023.1)
other 8	(predict for NP_171859.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G03620 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.1	scpl31	serine carboxypeptidase-like 31	[detail]	837649
4.7	PERK4	roline-rich extensin-like receptor kinase 4	[detail]	816362
4.5	AT3G45160	Putative membrane lipoprotein	[detail]	823652
3.9	AT1G78780	pathogenesis-related family protein	[detail]	844214

Coexpressed
gene list

[Coexpressed gene list for AT1G03620]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264815_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264815_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264815_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	839448
Refseq ID (protein)	NP_001321012.1
	NP_001321013.1
	NP_001321014.1
	NP_001321015.1
	NP_001321016.1
	NP_001321017.1
	NP_001321018.1
	NP_001321019.1
	NP_001321020.1
	NP_001321021.1
	NP_001321022.1
	NP_001321023.1
	NP_171859.1

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