ATTED-II : GeneID search result

[←][→] ath AT1G03550 Gene

functional annotation

Function

Secretory carrier membrane protein (SCAMP) family protein

GO BP

GO:0015031 [list] [network] protein transport

(724 genes)

IBA

GO CC

GO:0055038 [list] [network] recycling endosome membrane	(3 genes)	IBA
GO:0032588 [list] [network] trans-Golgi network membrane	(12 genes)	IBA
GO:0030658 [list] [network] transport vesicle membrane	(42 genes)	IEA
GO:0000139 [list] [network] Golgi membrane	(404 genes)	IBA
GO:0005794 [list] [network] Golgi apparatus	(1430 genes)	IBA
GO:0005886 [list] [network] plasma membrane	(3771 genes)	IEA ISM
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA

GO MF

KEGG

Protein

NP_001320324.1 NP_001320325.1 NP_001320326.1 NP_001320327.1 NP_001320328.1 NP_001320329.1 NP_563686.1

BLAST

NP_001320324.1 NP_001320325.1 NP_001320326.1 NP_001320327.1 NP_001320328.1 NP_001320329.1 NP_563686.1

Orthologous

[Ortholog page] SCAMP3 (ath) SCAMP2 (ath) LOC4327836 (osa) LOC4339247 (osa) LOC4343617 (osa) LOC7497391 (ppo) LOC11429256 (mtr) LOC11445757 (mtr) LOC25487612 (mtr) LOC25492086 (mtr) LOC100243027 (vvi) LOC100255491 (vvi) LOC100282807 (zma) LOC100284626 (zma) LOC100285854 (zma) LOC100303986 (zma) LOC100777657 (gma) LOC100795535 (gma) LOC100796729 (gma) LOC100814913 (gma) LOC100815455 (gma) LOC101244619 (sly) LOC101255769 (sly) LOC101259455 (sly) LOC101260101 (sly) LOC103635827 (zma) LOC103828139 (bra) LOC103836616 (bra) LOC103871883 (bra)

Subcellular
localization
wolf

plas 4, cyto_plas 4, cyto 2, E.R. 2	(predict for NP_001320324.1)
plas 6, E.R. 2, cyto 1	(predict for NP_001320325.1)
plas 7, cyto_plas 4, E.R. 1	(predict for NP_001320326.1)
plas 9, E.R. 1, golg 1	(predict for NP_001320327.1)
plas 7, golg 2	(predict for NP_001320328.1)
plas 6, extr 1, golg 1, chlo 1, E.R. 1	(predict for NP_001320329.1)
plas 8, E.R. 1	(predict for NP_563686.1)

Subcellular
localization
TargetP

other 7, chlo 4	(predict for NP_001320324.1)
other 7, chlo 4	(predict for NP_001320325.1)
other 7, chlo 4	(predict for NP_001320326.1)
other 7, chlo 4	(predict for NP_001320327.1)
other 9	(predict for NP_001320328.1)
other 3	(predict for NP_001320329.1)
other 7, chlo 4	(predict for NP_563686.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for SCAMP4]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264835_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264835_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264835_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	839464
Refseq ID (protein)	NP_001320324.1
	NP_001320325.1
	NP_001320326.1
	NP_001320327.1
	NP_001320328.1
	NP_001320329.1
	NP_563686.1

The preparation time of this page was 0.2 [sec].