[←][→] ath   AT1G04240 Gene
functional annotation
Function   AUX/IAA transcriptional regulator family protein  
GO BP
GO:0009734 [list] [network] auxin-activated signaling pathway  (196 genes)  IEA  
GO:0009733 [list] [network] response to auxin  (407 genes)  IMP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04075 [list] [network] Plant hormone signal transduction (273 genes)
Protein NP_001322162.1  NP_171920.1 
BLAST NP_001322162.1  NP_171920.1 
Orthologous [Ortholog page] IAA3 (sly)  IAA2 (ath)  IAA1 (ath)  ATAUX2-11 (ath)  LOC4334431 (osa)  LOC4352722 (osa)  LOC7467523 (ppo)  LOC7474608 (ppo)  LOC7476883 (ppo)  LOC11417809 (mtr)  LOC11431266 (mtr)  LOC25482908 (mtr)  LOC25484458 (mtr)  LOC100192924 (zma)  LOC100259648 (vvi)  LOC100262403 (vvi)  LOC100264878 (vvi)  LOC100280600 (zma)  LOC100286028 (zma)  LOC100527777 (gma)  IAA21 (sly)  LOC100780396 (gma)  LOC100780752 (gma)  LOC100792134 (gma)  LOC100799875 (gma)  LOC100800212 (gma)  LOC100809479 (gma)  LOC101055541 (sly)  IAA2 (sly)  LOC101055550 (sly)  LOC101055551 (sly)  IAA4 (sly)  LOC103833452 (bra)  LOC103834036 (bra)  LOC103839230 (bra)  LOC103843664 (bra)  LOC103844276 (bra)  LOC103868947 (bra) 
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_plas 2,  E.R. 1,  nucl_plas 1  (predict for NP_001322162.1)
chlo 6,  nucl 3,  chlo_mito 3  (predict for NP_171920.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001322162.1)
other 8  (predict for NP_171920.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 8
Genes directly connected with SHY2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 ATAUX2-11 AUX/IAA transcriptional regulator family protein [detail] 834390
7.1 IAA2 indole-3-acetic acid inducible 2 [detail] 821877
6.7 IAA1 indole-3-acetic acid inducible [detail] 827103
6.5 IAA6 indole-3-acetic acid 6 [detail] 841717
6.2 AUF1 F-box family protein [detail] 844146
5.9 PKS2 phytochrome kinase substrate 2 [detail] 837989
5.1 AXR3 AUX/IAA transcriptional regulator family protein [detail] 839568
Coexpressed
gene list		 [Coexpressed gene list for SHY2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263656_at
263656_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263656_at
263656_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263656_at
263656_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839570      
Refseq ID (protein) NP_001322162.1 
NP_171920.1 


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