[←][→] ath   AT1G28240 Gene
functional annotation
Function   strawberry notch protein (DUF616)  
GO BP
GO:0010246 [list] [network] rhamnogalacturonan I biosynthetic process  (4 genes)  IMP  
GO:0048358 [list] [network] mucilage pectin biosynthetic process  (7 genes)  IMP  
GO:0080001 [list] [network] mucilage extrusion from seed coat  (10 genes)  IMP  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IDA  
GO MF
GO:0016757 [list] [network] transferase activity, transferring glycosyl groups  (644 genes)  IGI IMP ISM  
KEGG
Protein NP_174145.1 
BLAST NP_174145.1 
Orthologous [Ortholog page] AT1G53040 (ath)  LOC4323906 (osa)  LOC4339416 (osa)  LOC7462332 (ppo)  LOC7477403 (ppo)  LOC11413571 (mtr)  LOC11441256 (mtr)  LOC25493158 (mtr)  LOC100246918 (vvi)  LOC100256311 (vvi)  LOC100382081 (zma)  LOC100779951 (gma)  LOC100783387 (gma)  LOC100792761 (gma)  LOC100804922 (gma)  LOC100810247 (gma)  LOC100810918 (gma)  LOC100854067 (vvi)  LOC101247562 (sly)  LOC101250652 (sly)  LOC101254615 (sly)  LOC101259611 (sly)  LOC103630624 (zma)  LOC103633241 (zma)  LOC103635853 (zma)  LOC103635859 (zma)  LOC103635877 (zma)  LOC103829026 (bra)  LOC103832699 (bra)  LOC103835341 (bra)  LOC103838975 (bra)  LOC103865296 (bra)  LOC103871160 (bra) 
Subcellular
localization
wolf
chlo 4,  plas 2,  cyto 1,  nucl_plas 1,  mito_plas 1  (predict for NP_174145.1)
Subcellular
localization
TargetP
other 6  (predict for NP_174145.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
Genes directly connected with AT1G28240 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.9 AT2G21120 magnesium transporter, putative (DUF803) [detail] 816647
5.7 LIP1 Ras-related small GTP-binding family protein [detail] 836603
5.4 EMB2756 transmembrane protein (DUF616) [detail] 840358
5.3 AT2G25190 PPPDE putative thiol peptidase family protein [detail] 817057
5.1 FATB fatty acyl-ACP thioesterases B [detail] 837372
Coexpressed
gene list		 [Coexpressed gene list for AT1G28240]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245660_at
245660_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245660_at
245660_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245660_at
245660_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839718      
Refseq ID (protein) NP_174145.1 


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