| functional annotation |
| Function |
Transducin/WD40 repeat-like superfamily protein |
|
| GO BP |
|
GO:0042273 [list] [network] ribosomal large subunit biogenesis
|
(76 genes)
|
IEA
|
 |
|
| GO CC |
|
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex
|
(130 genes)
|
ISS
|
|
|
GO:0005730 [list] [network] nucleolus
|
(477 genes)
|
IEA
|
|
|
GO:0005634 [list] [network] nucleus
|
(10793 genes)
|
ISM
|
|
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_001323159.1
NP_174226.1
|
| BLAST |
NP_001323159.1
NP_174226.1
|
| Orthologous |
[Ortholog page]
LOC4343330 (osa)
LOC7454539 (ppo)
LOC7454695 (ppo)
LOC25499511 (mtr)
LOC100260812 (vvi)
LOC100272883 (zma)
LOC100791506 (gma)
LOC100816020 (gma)
LOC101255904 (sly)
LOC103647701 (zma)
LOC103832143 (bra)
LOC103835280 (bra)
LOC103840494 (bra)
|
Subcellular
localization
wolf |
|
chlo 7,
nucl 1,
mito 1,
plas 1,
cyto_nucl 1,
cysk_nucl 1,
mito_plas 1
|
(predict for NP_001323159.1)
|
|
chlo 7,
nucl 1,
mito 1,
plas 1,
cyto_nucl 1,
cysk_nucl 1,
mito_plas 1
|
(predict for NP_174226.1)
|
|
Subcellular
localization
TargetP |
|
other 3,
chlo 3
|
(predict for NP_001323159.1)
|
|
other 3,
chlo 3
|
(predict for NP_174226.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03008 |
Ribosome biogenesis in eukaryotes |
4 |
 |
Genes directly connected with AT1G29320 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 13.7 |
AT2G18220 |
Noc2p family |
[detail] |
816337 |
| 13.2 |
AT4G16630 |
DEA(D/H)-box RNA helicase family protein |
[detail] |
827364 |
| 13.0 |
AT5G66540 |
U3 small nucleolar ribonucleoprotein |
[detail] |
836786 |
| 12.8 |
AT2G19385 |
zinc ion binding protein |
[detail] |
816457 |
| 12.1 |
AT1G15420 |
WD repeat protein |
[detail] |
838113 |
| 11.3 |
MEE21 |
PIN domain-like family protein |
[detail] |
818021 |
| 10.7 |
AT5G12220 |
las1-like family protein |
[detail] |
831096 |
| 10.5 |
AT2G40700 |
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
[detail] |
818665 |
| 10.4 |
AT5G19300 |
methyltransferase C9orf114 protein |
[detail] |
832050 |
| 9.6 |
AT1G08410 |
P-loop containing nucleoside triphosphate hydrolases superfamily protein |
[detail] |
837361 |
| 9.3 |
AT5G53770 |
Nucleotidyltransferase family protein |
[detail] |
835458 |
| 9.0 |
AT3G12340 |
FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
[detail] |
820412 |
| 8.7 |
AT5G22840 |
Protein kinase superfamily protein |
[detail] |
832347 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT1G29320]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AT1G29320 Gene
