ATTED-II : GeneID search result

[←][→] ath AT1G30200 Gene

functional annotation

Function

F-box family protein

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(5095 genes)

ISM

GO MF

KEGG

Protein

NP_564350.1 NP_973940.1

BLAST

NP_564350.1 NP_973940.1

Orthologous

[Ortholog page] AT4G18380 (ath) AT5G46170 (ath) LOC4324608 (osa) LOC4339280 (osa) LOC7495309 (ppo) LOC11439322 (mtr) LOC100251447 (vvi) LOC100280529 (zma) LOC100284740 (zma) LOC100284879 (zma) LOC100794477 (gma) LOC100802298 (gma) LOC101247348 (sly) LOC101248164 (sly) LOC103630579 (zma) LOC103827750 (bra) LOC103840426 (bra) LOC103853690 (bra) LOC103856300 (bra)

Subcellular
localization
wolf

cyto 4, chlo 3, cyto_nucl 3	(predict for NP_564350.1)
cyto 4, chlo 3, cyto_nucl 3	(predict for NP_973940.1)

Subcellular
localization
TargetP

other 8	(predict for NP_564350.1)
other 8	(predict for NP_973940.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G30200 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.5	AT3G61180	RING/U-box superfamily protein	[detail]	825290
5.7	AT3G15070	RING/U-box superfamily protein	[detail]	820736
5.4	AT1G55590	RNI-like superfamily protein	[detail]	842008
5.2	AT3G24070	Zinc knuckle (CCHC-type) family protein	[detail]	821993
4.4	AT4G18380	F-box family protein	[detail]	827567

Coexpressed
gene list

[Coexpressed gene list for AT1G30200]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

256193_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

256193_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

256193_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	839900
Refseq ID (protein)	NP_564350.1
Refseq ID (protein)	NP_973940.1

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