[←][→] ath   AT1G31340 Gene
functional annotation
Function   related to ubiquitin 1  
GO BP
GO:0045116 [list] [network] protein neddylation  (9 genes)  TAS  
GO:0009693 [list] [network] ethylene biosynthetic process  (24 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (407 genes)  TAS  
GO:0019941 [list] [network] modification-dependent protein catabolic process  (445 genes)  IBA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IGI  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IBA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0031386 [list] [network] protein tag  (27 genes)  IBA  
GO:0031625 [list] [network] ubiquitin protein ligase binding  (54 genes)  IBA  
KEGG
Protein NP_564379.2 
BLAST NP_564379.2 
Orthologous [Ortholog page] UBQ7 (ath)  LOC4341684 (osa)  LOC4347085 (osa)  LOC7462564 (ppo)  LOC7480437 (ppo)  LOC11426787 (mtr)  LOC25492777 (mtr)  LOC100241051 (vvi)  LOC100282222 (zma)  LOC100794152 (gma)  LOC100800163 (gma)  UBQ7 (sly)  LOC102664645 (gma)  LOC103629697 (zma)  LOC103635660 (zma)  LOC103828780 (bra)  LOC103833815 (bra)  LOC103867338 (bra) 
Subcellular
localization
wolf
cyto 5,  cyto_nucl 4,  chlo 2,  mito 1,  plas 1,  mito_plas 1  (predict for NP_564379.2)
Subcellular
localization
TargetP
other 8  (predict for NP_564379.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 3
Genes directly connected with RUB1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.4 SCE1 sumo conjugation enzyme 1 [detail] 824956
7.2 AT1G29850 double-stranded DNA-binding family protein [detail] 839863
6.0 AT5G35680 Nucleic acid-binding, OB-fold-like protein [detail] 833541
Coexpressed
gene list		 [Coexpressed gene list for RUB1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262551_at
262551_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262551_at
262551_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262551_at
262551_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840023      
Refseq ID (protein) NP_564379.2 


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