[←][→] ath   AT1G33390 Gene
functional annotation
Function   RNA helicase family protein  
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (27 genes)  IBA  
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_001320693.1  NP_174605.1 
BLAST NP_001320693.1  NP_174605.1 
Orthologous [Ortholog page] LOC4330659 (osa)  LOC7487803 (ppo)  LOC11411690 (mtr)  LOC11424352 (mtr)  LOC100262427 (vvi)  LOC100782767 (gma)  LOC100788201 (gma)  LOC101245407 (sly)  LOC103627696 (zma)  LOC103854246 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 1,  plas 1,  vacu 1,  E.R. 1,  cysk 1,  E.R._vacu 1,  cysk_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001320693.1)
nucl 6,  cyto 1,  plas 1,  vacu 1,  E.R. 1,  cysk 1,  E.R._vacu 1,  cysk_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_174605.1)
Subcellular
localization
TargetP
other 8,  chlo 5  (predict for NP_001320693.1)
other 8,  chlo 5  (predict for NP_174605.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath03013 RNA transport 3
ath03040 Spliceosome 2
Genes directly connected with FAS4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 AT5G28740 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 832986
6.9 AT5G54910 DEA(D/H)-box RNA helicase family protein [detail] 835582
6.7 AT1G42440 pre-rRNA-processing TSR1-like protein [detail] 840848
5.6 AT5G49530 SIN-like family protein [detail] 835014
Coexpressed
gene list		 [Coexpressed gene list for FAS4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256511_at
256511_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256511_at
256511_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256511_at
256511_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840232      
Refseq ID (protein) NP_001320693.1 
NP_174605.1 


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