[←][→] ath   AT1G35530 Gene
functional annotation
Function   DEAD/DEAH box RNA helicase family protein  
GO BP
GO:0045128 [list] [network] negative regulation of reciprocal meiotic recombination  (4 genes)  IGI IMP  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (68 genes)  IDA IMP  
GO:0051321 [list] [network] meiotic cell cycle  (166 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001185141.1  NP_001319152.1  NP_001320963.1  NP_001320964.1  NP_001320965.1 
BLAST NP_001185141.1  NP_001319152.1  NP_001320963.1  NP_001320964.1  NP_001320965.1 
Orthologous [Ortholog page] AT1G36020 (ath)  LOC9272231 (osa)  LOC25485169 (mtr)  LOC100254868 (vvi)  LOC100820078 (gma)  LOC101256834 (sly)  LOC103654570 (zma)  LOC103868821 (bra)  LOC104880099 (vvi) 
Subcellular
localization
wolf
cyto 5,  nucl 3,  cysk 1,  nucl_plas 1  (predict for NP_001185141.1)
cyto 7,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_001319152.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001320963.1)
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001320964.1)
cyto 5,  nucl 3,  cysk 1,  nucl_plas 1  (predict for NP_001320965.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001185141.1)
other 7,  chlo 3  (predict for NP_001319152.1)
other 7,  chlo 3  (predict for NP_001320963.1)
other 7,  chlo 3  (predict for NP_001320964.1)
other 7,  chlo 3  (predict for NP_001320965.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 5
ath03030 DNA replication 2
Genes directly connected with FANCM on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 AT1G20720 RAD3-like DNA-binding helicase protein [detail] 838662
9.5 AT4G02110 transcription coactivator [detail] 828135
9.5 SYN3 Rad21/Rec8-like family protein [detail] 825124
8.2 RAD54 DNA repair/recombination protein [detail] 821455
6.2 RECQSIM RECQ helicase SIM [detail] 832830
6.1 CDC27a Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 820879
5.5 emb2411 DNA replication helicase [detail] 837406
4.4 AT1G48580 nuclear localized protein [detail] 841279
Coexpressed
gene list		 [Coexpressed gene list for FANCM]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262036_at
262036_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262036_at
262036_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262036_at
262036_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840448      
Refseq ID (protein) NP_001185141.1 
NP_001319152.1 
NP_001320963.1 
NP_001320964.1 
NP_001320965.1 


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