ATTED-II : GeneID search result

[←][→] ath AT1G42540 Gene

functional annotation

Function

glutamate receptor 3.3

GO BP

GO:0071230 [list] [network] cellular response to amino acid stimulus	(4 genes)	IMP
GO:0009864 [list] [network] induced systemic resistance, jasmonic acid mediated signaling pathway	(11 genes)	IMP
GO:0006874 [list] [network] cellular calcium ion homeostasis	(51 genes)	NAS
GO:0007267 [list] [network] cell-cell signaling	(52 genes)	IMP
GO:0006816 [list] [network] calcium ion transport	(53 genes)	IMP
GO:0009630 [list] [network] gravitropism	(90 genes)	IMP
GO:0009611 [list] [network] response to wounding	(212 genes)	IMP
GO:0045087 [list] [network] innate immune response	(322 genes)	IMP
GO:0050832 [list] [network] defense response to fungus	(517 genes)	IMP
GO:0009416 [list] [network] response to light stimulus	(700 genes)	NAS

GO CC

GO:0005886 [list] [network] plasma membrane	(3771 genes)	IBA ISM
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA

GO MF

GO:0008066 [list] [network] glutamate receptor activity	(2 genes)	IMP
GO:0005262 [list] [network] calcium channel activity	(18 genes)	IMP
GO:0005217 [list] [network] intracellular ligand-gated ion channel activity	(24 genes)	ISS
GO:0015276 [list] [network] ligand-gated ion channel activity	(33 genes)	IEA

KEGG

Protein

NP_001322169.1 NP_001322170.1 NP_001322171.1 NP_174978.1

BLAST

NP_001322169.1 NP_001322170.1 NP_001322171.1 NP_174978.1

Orthologous

[Ortholog page] GLR3.6 (ath) LOC4328089 (osa) LOC7480469 (ppo) LOC7492132 (ppo) LOC11408589 (mtr) LOC11418212 (mtr) LOC11440528 (mtr) LOC100258104 (vvi) LOC100262768 (vvi) LOC100275125 (zma) LOC100279951 (zma) LOC100777478 (gma) LOC100785258 (gma) LOC100788917 (gma) LOC100789442 (gma) LOC100793320 (gma) LOC100812261 (gma) LOC101253685 (sly) GLR3.5 (sly) LOC102661260 (gma) LOC103626528 (zma) LOC103645580 (zma) LOC103833303 (bra) LOC103841075 (bra)

Subcellular
localization
wolf

plas 3, chlo 2, vacu 2, E.R. 2, E.R._vacu 2	(predict for NP_001322169.1)
plas 3, chlo 2, vacu 2, E.R. 2, E.R._vacu 2	(predict for NP_001322170.1)
chlo 4, vacu 3, nucl 1, mito 1, plas 1, extr 1, golg 1, nucl_plas 1, golg_plas 1, mito_plas 1	(predict for NP_001322171.1)
plas 3, chlo 2, vacu 2, E.R. 2, E.R._vacu 2	(predict for NP_174978.1)

Subcellular
localization
TargetP

mito 4	(predict for NP_001322169.1)
mito 4	(predict for NP_001322170.1)
mito 4	(predict for NP_001322171.1)
mito 4	(predict for NP_174978.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	2

Genes directly connected with GLR3.3 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.9	SPA1	SPA (suppressor of phyA-105) protein family	[detail]	819242
5.2	SS2	starch synthase 2	[detail]	820294
5.1	CM3	chorismate mutase 3	[detail]	843269
4.9	GLR3.5	glutamate receptor 3.5	[detail]	817800
3.9	GLR3.4	glutamate receptor 3.4	[detail]	839268

Coexpressed
gene list

[Coexpressed gene list for GLR3.3]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

256541_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

256541_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

256541_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	840859
Refseq ID (protein)	NP_001322169.1
	NP_001322170.1
	NP_001322171.1
	NP_174978.1

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