[←][→] ath   AT1G43130 Gene
functional annotation
Function   like COV 2  
GO BP
GO:0010222 [list] [network] stem vascular tissue pattern formation  (6 genes)  ISS  
GO CC
GO:0005802 [list] [network] trans-Golgi network  (298 genes)  IDA  
GO:0005768 [list] [network] endosome  (424 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IBA IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
KEGG
Protein NP_001321430.1  NP_001321431.1  NP_564483.1 
BLAST NP_001321430.1  NP_001321431.1  NP_564483.1 
Orthologous [Ortholog page] LOC4325049 (osa)  LOC4338904 (osa)  LOC7467805 (ppo)  LOC7489777 (ppo)  LOC11423678 (mtr)  LOC100191373 (zma)  LOC100193368 (zma)  LOC100217242 (zma)  LOC100266324 (vvi)  LOC100285618 (zma)  LOC100792693 (gma)  LOC100801920 (gma)  LOC101249632 (sly)  LOC101264314 (sly)  LOC103833139 (bra) 
Subcellular
localization
wolf
plas 4,  vacu 2,  nucl_plas 2,  cysk_plas 2,  E.R._plas 2,  mito_plas 2  (predict for NP_001321430.1)
plas 4,  vacu 2,  nucl_plas 2,  cysk_plas 2,  E.R._plas 2,  mito_plas 2  (predict for NP_001321431.1)
plas 2,  E.R. 2,  cysk 2,  cysk_plas 2,  E.R._plas 2  (predict for NP_564483.1)
Subcellular
localization
TargetP
scret 5,  mito 4,  other 3  (predict for NP_001321430.1)
scret 5,  mito 4,  other 3  (predict for NP_001321431.1)
other 7,  chlo 3  (predict for NP_564483.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
ath03060 Protein export 4
Genes directly connected with LCV2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 AT2G15240 UNC-50 family protein [detail] 816013
5.6 AT5G27430 Signal peptidase subunit [detail] 832802
5.4 AT4G29960 transmembrane protein [detail] 829119
Coexpressed
gene list		 [Coexpressed gene list for LCV2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264422_at
264422_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264422_at
264422_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264422_at
264422_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840912      
Refseq ID (protein) NP_001321430.1 
NP_001321431.1 
NP_564483.1 


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